Pairwise Alignments

Query, 316 a.a., ABC transporter, permease protein from Pseudomonas putida KT2440

Subject, 317 a.a., ABC-type dipeptide/oligopeptide/nickel transport system, permease component from Dechlorosoma suillum PS

 Score =  176 bits (446), Expect = 7e-49
 Identities = 109/322 (33%), Positives = 176/322 (54%), Gaps = 21/322 (6%)

Query: 1   MRRYLIGRVGQALLVLWGAYTITYFILYLLPGDTLAIMLSASGMEADGLSPEDLAKA-RT 59
           M  Y++ R+  A+ +      +++ ++YL PGD L  +  A        +PE++ +A ++
Sbjct: 1   MFAYILKRLIYAIPIALSVTVVSFVLVYLAPGDPLNAIAPAD-------APEEVIQALKS 53

Query: 60  YYGLDKGLFEQYFDLLWRALHGDLGQSLSLGRPVTALLAERLPQTLALAGAAIALSLLAG 119
            YGLDK +  QY   L RA+ GDLG S++ GR VTA +   +  TL LAG A A+ ++ G
Sbjct: 54  AYGLDKPVPVQYGLWLMRAVQGDLGLSIASGREVTAEVLSAVSNTLLLAGMAAAIGVVLG 113

Query: 120 VGLACLTAYLQWRPLKTALARLPSLGFSVPVFWMGLLLIQVFAFALGWFPATGS------ 173
             L  L  Y     +  A   L  +G S+P +W+GL+L  +F+  L WFPA G+      
Sbjct: 114 CILGALAGYRHGTWIDKAATALSVVGVSIPHYWLGLVLTILFSIWLPWFPAMGAGPGGSG 173

Query: 174 ------QGLASLVLPAITLAIPSAAVYAQVLQRGFQGVWQEPYITTAFAKGLSRAQVQAR 227
                 + L  LVLPA+TL++    +  + ++     +  + ++T   A+GLS   V  R
Sbjct: 174 EWLWDLEHLRYLVLPALTLSVIPMGIITRTVRALVADMLGQEFVTALRARGLSGGAV-FR 232

Query: 228 HGLRNAALPLLTLVGLQVGNTVSGAVLVETIFSRNGVGRLAQEAVLRQDIPVVLAIVGAS 287
           H  +N A  +L + GLQ+G  + G++LVET+F+  G G L   A+ ++DIP++   +   
Sbjct: 233 HVAKNTAPTVLAVAGLQIGYLMGGSILVETVFAWPGTGFLLNTAIFQRDIPLLQGTILVL 292

Query: 288 AAAFVVVNLLVDLFYPYLDPRI 309
              FVV+NLLVD+  P +DPR+
Sbjct: 293 CMFFVVLNLLVDILQPLIDPRM 314