Pairwise Alignments

Query, 342 a.a., ABC transporter, periplasmic binding component-related protein from Pseudomonas putida KT2440

Subject, 912 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein from Dechlorosoma suillum PS

 Score = 82.4 bits (202), Expect = 4e-20
 Identities = 78/314 (24%), Positives = 129/314 (41%), Gaps = 13/314 (4%)

Query: 9   ARPLRSLLA--AALLPTTLTIAPLAIAG--DKVVLLTSWYAQAEQGGFYQALADGLYEKE 64
           +RPL  L    +A L   L I P A A   + V L   W  Q +  G+Y A   G Y + 
Sbjct: 7   SRPLLPLCRHLSACLTFLLLILPAAPAQALENVTLQLRWRHQFQFAGYYAAQMQGYYREA 66

Query: 65  GLDVSIRMGGPQVNGMQLLVSKQADFIVNYDLQILKSVEQGLPVVAVAAPFQGDPQGLMT 124
           GL V IR   P  + +Q ++  +A + V     +L    +G PV+ +A  FQ  P  +  
Sbjct: 67  GLAVDIREAEPGQDAVQAVLEGKAQYGVGTS-DLLVHYHRGAPVLVLAVIFQHSPLAIAA 125

Query: 125 H--ADVSGLDALGGKPVLVSTSGQQTWWPWLKGKYQLADNQARPYTFNLQPFLADPQTTQ 182
              A +  +  L GK V++     +      + +         P++  +Q  L       
Sbjct: 126 RRAAGIRNIHDLNGKKVMIEPGANELLGYLGRERVDTDSLALEPHSQTVQDLLDGRVDAL 185

Query: 183 QAYASSELFQAIKAGVTPNFFLFADAGYPPYGSTVVTRQDIIAEHPERVAGFVRASMEGW 242
             Y + EL++  K G     F    +G   YG  + + Q  + +HPER+  F  AS++GW
Sbjct: 186 SIYRTDELYELRKQGERVVVFTPESSGLDFYGDNLFSTQAELRQHPERLKAFRAASLKGW 245

Query: 243 KRYLDDP-SAGNALIKRDNPNMTDELLAWGVSTLKQYRLVTGGEAATQGIGTMTDSRWQA 301
              +  P    + ++K      + + LA+     +  ++V   +A     G     RW+ 
Sbjct: 246 SYAMAHPQEVIDYILKHYGRRHSRDHLAF-----EAEQMVPLVQAQLVEPGYFHVGRWRH 300

Query: 302 TRDFMVEAGLLGPD 315
             D   + GLL  D
Sbjct: 301 MADTYADLGLLPRD 314