Pairwise Alignments

Query, 267 a.a., ABC transporter, permease protein from Pseudomonas putida KT2440

Subject, 298 a.a., Binding-protein-dependent transport systems inner membrane component (NCBI) from Rhodospirillum rubrum S1H

 Score =  100 bits (250), Expect = 3e-26
 Identities = 77/268 (28%), Positives = 128/268 (47%), Gaps = 41/268 (15%)

Query: 21  LLVGALLLGVWQLACI----------------AWKVPVYL----------VPSPADIG-- 52
           L+VGA+LL +W  A +                 W +   L          +P+P  +G  
Sbjct: 19  LVVGAVLLCLWYAAALLLNQGLVDQAMVRSGQQWSIGQRLEAAATHQRPILPTPVQVGAE 78

Query: 53  --RTLVADGPM----LLGALWMTLKITFLSFALAVVIGTLAAFVFVQSRVVEASLFPYAI 106
             +++V   P     LL    +T   T + F L  ++G + A   V+ RV+EASL P+ I
Sbjct: 79  LWKSVVMTKPTSPRGLLLHTGVTGASTLVGFVLGTLLGLVIAVGIVRFRVLEASLLPWVI 138

Query: 107 LLQVTPVVAIAPLIIIWCSDTTLALVICATLVAI----FPIIANTVLGLRSVNPGLLNLF 162
             Q  P++AIAP++++      L  ++   ++++    FP+    V GLRS +   ++L 
Sbjct: 139 ASQTIPILAIAPMVVVVLGAIGLTGLVPKAIISMYLCFFPVTVGMVKGLRSADALSMDLM 198

Query: 163 HLNRASRWQVLLRLRIPSALPCFFAGLRIASGLALIGAVVAEFVAGTGGTGAGLAYQILQ 222
               A   QV  RLR+P+ALP  FA +++A   AL+GA+V E      G   GL  ++L 
Sbjct: 199 RTYAARPSQVFWRLRLPAALPYLFASMKVAIAAALVGAIVGELPT---GAAMGLGARLLA 255

Query: 223 AGFQLNIPRLFAALVLIALTGVALFSLM 250
             +     +++AALV+ A   + L  L+
Sbjct: 256 GSYYGQTVQMWAALVMAAALSLFLVFLV 283