Pairwise Alignments

Query, 328 a.a., conserved protein of unknown function from Pseudomonas putida KT2440

Subject, 340 a.a., polysaccharide biosynthesis protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 48.5 bits (114), Expect = 2e-10
 Identities = 64/249 (25%), Positives = 104/249 (41%), Gaps = 37/249 (14%)

Query: 4   MVTGANGFVGRQLVQRLLDLGEL--------RGRR-----IEALLVLDQALDGLPEDARL 50
           ++TG  GF+G  L+++LL L +          GR+     +++L+  +Q +       R 
Sbjct: 19  LITGVAGFIGSNLLEQLLKLNQTVIGLDNFATGRQHNLDEVQSLVTSEQWM-------RF 71

Query: 51  RRHHGSVTDAALLRRVLADGVDVVFH---LVSVPGGAAETQYERGYQVNLQASLELLDQL 107
              +G + D A+   V+ +GVD V H   L SVP   A+         N+   L +L   
Sbjct: 72  SFINGDIRDYAICEAVV-NGVDYVLHQAALGSVPRSIADPITTNA--ANITGFLNMLQAA 128

Query: 108 RNPLCPPVLVYASSVAVYGGK--LP-TRMDEGQPASPQLSYAAHKRMVEIALQDLARRGE 164
           +         YA+S + YG    LP    + G P SP   YA  K + E+     AR   
Sbjct: 129 KEAEVKS-FTYAASSSTYGDHPALPKVEQNIGNPLSP---YAVTKYVNELYASVYARTYG 184

Query: 165 VDGRALRLPGIVARPREPNGLRSAFMSDLLHAYVAGEAYTCPVSPEASAWWMSARCCVDN 224
            +   LR   +  R ++PNG  +A +     + + GE        E S  +    C +DN
Sbjct: 185 FETIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIKGEDVFINGDGETSRDF----CYIDN 240

Query: 225 LLHAAELEA 233
           ++    L A
Sbjct: 241 VVQMNILAA 249