Pairwise Alignments

Query, 328 a.a., conserved protein of unknown function from Pseudomonas putida KT2440

Subject, 318 a.a., NAD dependent nucleotide-diphosphate-sugar epimerase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 62.0 bits (149), Expect = 2e-14
 Identities = 49/211 (23%), Positives = 95/211 (45%), Gaps = 15/211 (7%)

Query: 3   VMVTGANGFVGRQLVQRLLDLGELRGRRIEALLVLDQALDGLPEDARLRRHHGS----VT 58
           +++ GA G +G +L        ELR RR     V+   + G      L+    S    VT
Sbjct: 4   ILIIGATGQIGSELTM------ELR-RRYGNTNVVAGYIQGAEPKGELKESGPSAVVDVT 56

Query: 59  DAALLRRVLAD-GVDVVFHLVSVPGGAAETQYERGYQVNLQASLELLDQLRNPLCPPVLV 117
           +  ++  V+ +  +D +++L ++    AE++ +  +++ +     +L+  R   C   + 
Sbjct: 57  NGEMIESVVKEYHIDTIYNLAALLSVVAESKPKLAWKIGIDGLWNVLEVAREQGC--AVF 114

Query: 118 YASSVAVYGGKLP-TRMDEGQPASPQLSYAAHKRMVEIALQDLARRGEVDGRALRLPGIV 176
             SS+  +G   P T+  +     P+  Y   K   E+       +  VD RA+R PGI+
Sbjct: 115 TPSSIGSFGASTPHTQTPQDTIQRPRTMYGVTKVTTELLSDYYFNKYGVDTRAVRFPGII 174

Query: 177 ARPREPNGLRSAFMSDLLHAYVAGEAYTCPV 207
           +    P G  + +  D+ ++ V GE + CP+
Sbjct: 175 SNVTPPGGGTTDYAVDIYYSAVRGEKFVCPI 205