Pairwise Alignments

Query, 396 a.a., Major facilitator family transporter from Pseudomonas putida KT2440

Subject, 448 a.a., Arabinose efflux permease from Pseudomonas stutzeri RCH2

 Score = 57.8 bits (138), Expect = 6e-13
 Identities = 72/259 (27%), Positives = 107/259 (41%), Gaps = 34/259 (13%)

Query: 59  LVIALLAPLAGVLADRVGRRALLLASMLLYSLCGLLPL----WLDSLVLIVASRAGIGLA 114
           +V A+     G +AD   RR ++   +  +S  GL  +    W     L+V  R GIG+ 
Sbjct: 58  IVYAIAGLPLGRMADLGSRRKIMGWGLTAWS--GLTAVNGLAWNFWSFLLV--RMGIGIG 113

Query: 115 EAGIMTCCTTLMGDYFDGQRRARLFALQMVVTSLAAALFMGVGGALGES--DWRTPFTLY 172
           EA       +L+GD F   +RAR   + M+   L   L     G++ E+   WR PF + 
Sbjct: 114 EASYAPAANSLIGDLFPAHKRARAMGIFMLGLPLGLLLAFFTIGSMVEAFGSWRAPFFIA 173

Query: 173 AVGALCLPLMALLLWEPRACQAASEASVDSRFP---------------WAALTPLYLLTV 217
           AV  L L L    + EP+  + A+E    S+ P               W  L  L     
Sbjct: 174 AVPGLVLALFIFFIKEPK--RGAAETVKVSQEPVKQPMRKVLSIRTFWWLVLAGLAFNFA 231

Query: 218 LAGVSLFIVPVQAGYVLQLLHIDAPRQVGLAMGANQLG--VLAGALAFRLLARLPAGRLL 275
               + F+VP+   Y    L + A    G+ +G   L    L G +A R+  R   GRL+
Sbjct: 232 TYACNAFMVPLLMRYHGVSL-VQASVATGVIVGLTGLFGLTLGGWVADRIHQRFARGRLI 290

Query: 276 ----AMGFATAGLGGGLMA 290
               +M  AT   G  L+A
Sbjct: 291 FAAVSMLIATIATGYALLA 309