Pairwise Alignments

Query, 396 a.a., Major facilitator family transporter from Pseudomonas putida KT2440

Subject, 379 a.a., Bcr/CflA subfamily drug resistance transporter (RefSeq) from Shewanella loihica PV-4

 Score = 70.9 bits (172), Expect = 6e-17
 Identities = 96/376 (25%), Positives = 153/376 (40%), Gaps = 46/376 (12%)

Query: 14  LLLFGSCLPVLGAVLIAPVLPRMHAYFAETPGVAVLVPVALTLPALVIALLAPLAGV--- 70
           L++     P +   L +P LP + A F         VP+AL    L I  LA   GV   
Sbjct: 9   LMVILMMFPQIVETLYSPALPHIAAGFD--------VPLALAGQTLSIYFLAFAFGVVCW 60

Query: 71  --LADRVGRRALLLASMLLYSLCGLLPLWLDSLVLIVASRA--GIGLAEAGIMTCCTTLM 126
             L D +GRR  +L  + LY +     LW  S   ++A RA    G A   ++T   T++
Sbjct: 61  GILCDHLGRRRTMLLGLGLYGIAAFAALWAPSFQWLLAMRALSAFGAAVGSVVT--QTML 118

Query: 127 GDYFDGQRRARLF-------ALQMVVTSLAAALFMGVGG--ALGESDWRTPFTLYAVGAL 177
            D FDG   A++F       A+  VV  L+  L   +GG  A+  +       LYAV  L
Sbjct: 119 RDSFDGTALAKVFAYMGMGIAISPVVGMLSGGLLTSLGGYPAVFFTLSLMAVLLYAVCLL 178

Query: 178 CLPLMALLLWEPRACQAASEASVDSRFPWAALTPLYLLTVLAGVSLFIVPVQAGYVLQLL 237
            LP       +P    A ++        W       LL     V LF   +Q  +V Q L
Sbjct: 179 RLPETRPATMQPLPLWALAKRLATDGNIWHNA----LLVAGFNVLLFSYYLQGPFVFQRL 234

Query: 238 HIDAPRQVGLAMGANQLGVLAGALAFRLLARLPAG--RLLAMGFATAGLGGGLMALASSH 295
            + + +  G +  A  +G L G+   + L +  A   RLL +    A +G   + L+ +H
Sbjct: 235 GL-STQAFGYSGIALAIGTLVGSAINKTLLQRGASQPRLLRLASLLALVGAVGVYLSETH 293

Query: 296 APVVLAVLINGLGVGLLLPTLITLVMQQVGFDQRGRATG------------GFTSAIFAG 343
              +L +++     G+ +P +++  + +   DQ G A              G      A 
Sbjct: 294 LGFLLPMVLIVAAFGIAIPNILSQALVEYR-DQAGAAGALFGLLYYLLIALGLAMVSLAE 352

Query: 344 EFVSPLIVLALTAGVA 359
           +   PL++ +L   +A
Sbjct: 353 QLGGPLLITSLLLSLA 368