Pairwise Alignments

Query, 396 a.a., Major facilitator family transporter from Pseudomonas putida KT2440

Subject, 410 a.a., putative sugar transporter (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 71.6 bits (174), Expect = 4e-17
 Identities = 72/318 (22%), Positives = 131/318 (41%), Gaps = 28/318 (8%)

Query: 19  SCLPVLGAVLIAPVLPRMHAYFAETPGVAVLVPVALTLPALVIALLAPLAGVLADRVGRR 78
           S L  L  + ++P+L  +   F +   + +   +  +LP+L+I     L G L ++V   
Sbjct: 22  SALTSLPGLAVSPILGDLTKIFPKATDLDI--QMLTSLPSLLIIPFILLGGKLTEKVDFV 79

Query: 79  ALLLASMLLYSLCGLLPLWLDSLVLIVASRAGIGLAEAGIMTCCTTLMGDYFDGQRRARL 138
            +L   + L++  G+L L  + +  ++   A +G+    I+   T L+  YF G  R + 
Sbjct: 80  RILKIGLWLFAASGILYLISNKMWQLIVVSALLGIGSGLIIPLSTGLISKYFVGTYRVKQ 139

Query: 139 FALQMVVTSLAAALFMGVGGALGESDWRTPFTLYAVGALCLPLMALLL---WEPRACQAA 195
           F L   +T+    +   V G L E  W  PF +Y      LPL+++LL    +     AA
Sbjct: 140 FGLSSAITNFTLVIATAVTGYLAEVSWHLPFLVY-----LLPLISILLVGHLKESRSDAA 194

Query: 196 SEASVDSRFPWAA--------------LTPLYLLTVLAGVSLFIVPV---QAGYVLQLLH 238
            E S  S  P                 +  L  + +  GV+ FIV        ++++  H
Sbjct: 195 VEPSSQSTAPSGQTAAADTGGSKYGIHIRHLLQIMLFYGVTTFIVLAVIFNLSFLMEKHH 254

Query: 239 IDAPRQVGLAMGANQLGVLAGALAFRLLARLPAGRLLAMGFATAGLGGGLMALASSHAPV 298
             +    GL +    L ++A       +      R  A    +  +G  L+ +A     +
Sbjct: 255 FSSGNS-GLMISLFFLAIMAPGFCLDKIVDELKERTKAYSLLSMAVGLALIWIAPIEWLI 313

Query: 299 VLAVLINGLGVGLLLPTL 316
           +   ++ GLG G++ P L
Sbjct: 314 IPGCILVGLGYGIIQPML 331



 Score = 32.7 bits (73), Expect = 2e-05
 Identities = 28/116 (24%), Positives = 52/116 (44%), Gaps = 1/116 (0%)

Query: 261 LAFRLLARLPAGRLLAMGFATAGLGGGLMALASSHAPVVLAVLINGLGVGLLLPTLITLV 320
           L  +L  ++   R+L +G       G L  +++    +++   + G+G GL++P    L+
Sbjct: 68  LGGKLTEKVDFVRILKIGLWLFAASGILYLISNKMWQLIVVSALLGIGSGLIIPLSTGLI 127

Query: 321 MQQVGFDQRGRATGGFTSAIFAGEFVSPLIVLALTAGVATHLPHALLLVAIGQLLL 376
            +      R +  G  +SAI     V    V    A V+ HLP  + L+ +  +LL
Sbjct: 128 SKYFVGTYRVKQFG-LSSAITNFTLVIATAVTGYLAEVSWHLPFLVYLLPLISILL 182