Pairwise Alignments

Query, 826 a.a., putative Transporter from Pseudomonas putida KT2440

Subject, 388 a.a., MMPL family transporter from Methanococcus maripaludis S2

 Score = 68.2 bits (165), Expect = 8e-16
 Identities = 51/233 (21%), Positives = 103/233 (44%), Gaps = 5/233 (2%)

Query: 550 NNQATLNMVTAGAPR----GLYNDDCSLLTLYAYLTDHKADTLARVVDSVQAFAQANDSE 605
           N+ AT+  +    P     G++N+D S++ +YA  TD   D    +V  + +        
Sbjct: 132 NDVATVKTIYQNLPESSRDGIFNNDYSMVVVYA-TTDAGTDDKKILVKDINSRLDEAPIP 190

Query: 606 QASFLMAAGSAGIEAATNQVVKQANRDMLWWVYGAVIVLCLVTFRSWRAVLCAVLPLVLT 665
               ++  G+  +     +++ ++          A+  + L+ FR+    +  ++P+V+ 
Sbjct: 191 PGVEVITTGTPALSELLKRMMDESQAVTGLASLLAIFTILLLYFRNIVKSVLPLIPVVVA 250

Query: 666 SILCEALMVALGIGVKVATLPVIALGVGIGVDYALYVMSIVLAQLRQGASLSQAYYRALL 725
            I     M    I +  AT  + +L +G+G+DY +++      +L  G S+ +A   A++
Sbjct: 251 VIWAAGSMAIFKIPMDTATSVMGSLLLGLGIDYGVHLFHRYEEELGDGKSMDEAINIAVV 310

Query: 726 FTGKVVMLTGITLAIGVGTWIFSPIKFQADMGVLLAFMFVWNMVGALILLPAL 778
            TG  V++T  T   G      +P+   A+MG +      + M   + LLP L
Sbjct: 311 STGSAVLVTTATTMAGFAALTIAPLSMMANMGKVCTLGIFFCMAAVICLLPPL 363



 Score = 65.5 bits (158), Expect = 5e-15
 Identities = 79/365 (21%), Positives = 157/365 (43%), Gaps = 21/365 (5%)

Query: 29  HRVLVLLLCLAATLLLGWQASRLTLNASFEKMIPRDHPFIHNYLEHRQELAGLGNAVRIA 88
           H + V+ + +  T+ + + A+ +     +EKM+P+D P I    E R E  G    +   
Sbjct: 17  HPLKVVAVVIVLTIFMAFLATGIESQTDYEKMVPQDDPVIVALNEIRDEFGGTETIMLGV 76

Query: 89  VANPRGSIYDKDYLHSLQQLNDAVYLLPGVDRAAMKSLWTPSTRWTGVTEEGLEGGPVVP 148
              P  S      +   + L+   +L    D  +M  + + S+R   +     +   V+P
Sbjct: 77  KLVPSDSSEKVTDIRDPRVLDLVDFLEQ--DIGSMDMITSVSSRADILKAYNND---VIP 131

Query: 149 DGYDGAAASLEALKRNVERSNEIGQLVAFDQRSSIVYVPLLEKTPDGQALDYTAFAHELE 208
           +      A+++ + +N+  S+  G    F+   S+V V     T D    D      ++ 
Sbjct: 132 ND----VATVKTIYQNLPESSRDG---IFNNDYSMVVV---YATTDAGTDDKKILVKDIN 181

Query: 209 T-LRERFQAQGVEIHITG---FAKVVGDLMDGLRQILLFFAAAIAITAAVLYWYTRCVRS 264
           + L E     GVE+  TG    ++++  +MD   Q +   A+ +AI   +L ++   V+S
Sbjct: 182 SRLDEAPIPPGVEVITTGTPALSELLKRMMDE-SQAVTGLASLLAIFTILLLYFRNIVKS 240

Query: 265 TALVVVCSLVAVIWQLGLLPLLGYALDPYSVLVPFLVFAIGMSHGAQKMNGIMQDIGRGM 324
             L ++  +VAVIW  G + +    +D  + ++  L+  +G+ +G    +   +++G G 
Sbjct: 241 V-LPLIPVVVAVIWAAGSMAIFKIPMDTATSVMGSLLLGLGIDYGVHLFHRYEEELGDGK 299

Query: 325 HRLVAARFTFRRLFLAGLTALLCDAVGFAVLMIIQIQVIQDLAVIASLGVAVLIFTNLIL 384
               A          A L        GFA L I  + ++ ++  + +LG+   +   + L
Sbjct: 300 SMDEAINIAVVSTGSAVLVTTATTMAGFAALTIAPLSMMANMGKVCTLGIFFCMAAVICL 359

Query: 385 LPVLL 389
           LP L+
Sbjct: 360 LPPLI 364