Pairwise Alignments

Query, 826 a.a., putative Transporter from Pseudomonas putida KT2440

Subject, 771 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  641 bits (1654), Expect = 0.0
 Identities = 326/761 (42%), Positives = 499/761 (65%), Gaps = 11/761 (1%)

Query: 23  ERALFNHRVLVLLLCLAATLLLGWQASRLTLNASFEKMIPRDHPFIHNYLEHRQELAGLG 82
           E  LF +R  V+ + +  T+ LG+QAS+L ++A+F K IP +H ++  YL+H+++  G  
Sbjct: 10  ESFLFRNRAWVVSIFILVTVFLGYQASQLKMDAAFIKNIPLNHSYMQTYLKHQKDFGG-A 68

Query: 83  NAVRIAVANPRGSIYDKDYLHSLQQLNDAVYLLPGVDRAAMKSLWTPSTRWTGVTEEGLE 142
           N++ +AV +  G+I++ ++  +L+ ++D ++ +PGVDR+ +KSL++PSTR+T V E+G  
Sbjct: 69  NSIMVAVEDTSGNIFNPNFFDTLKNVHDQLFFIPGVDRSQVKSLFSPSTRFTEVVEDGFA 128

Query: 143 GGPVVPDGYDGAAASLEALKRNVERSNEIGQLVAFDQRSSIVYVPLLEKTPD-GQALDYT 201
           GGPV+P  +      L  ++ N+E++  +G+L+A D  +++V   L++  P  G+ LD  
Sbjct: 129 GGPVIPADFATTETGLNTVRDNIEKAGIVGRLIANDYSAAMVSAQLMDFDPQTGKPLDTI 188

Query: 202 AFAHELET-LRERFQAQGVEIHITGFAKVVGDLMDGLRQILLFFAAAIAITAAVLYWYTR 260
           AFA +LE  LR +++   V+IHI GFAK+ GD+ DG + +LLFF  AI +TAA++Y +++
Sbjct: 189 AFAAQLEKELRGKYETDKVKIHIIGFAKMAGDVADGAKGVLLFFVIAILVTAAMVYLFSK 248

Query: 261 CVRSTALVVVCSLVAVIWQLGLLPLLGYALDPYSVLVPFLVFAIGMSHGAQKMNGIMQDI 320
            +  T L ++CSL AVIWQLGLL ++G+ LDP S+LVPFLVFAIG+SHG Q +N + + +
Sbjct: 249 SIILTLLPLICSLAAVIWQLGLLTVIGFGLDPMSILVPFLVFAIGVSHGVQIINAVKRRV 308

Query: 321 GRGMHRLVAARFTFRRLFLAGLTALLCDAVGFAVLMIIQIQVIQDLAVIASLGVAVLIFT 380
             G     A+   FR L + G  ALL D VGF  L+ I I +I++LA+ ASLGV V+I T
Sbjct: 309 MDGQSTKAASASAFRSLLVPGGVALLSDTVGFITLLFIDIGIIRELAISASLGVGVIILT 368

Query: 381 NLILLPVLLSYVGVSARAARRSLRAEEAEASGAGKHAVWRFLDLFTRRRWAAACIAVAAL 440
           NLILLP+++S+  ++     +   ++E  A      A+WR+L  F   ++A   I     
Sbjct: 369 NLILLPLVISFTEINVPPQGQPT-SDEVRAE-----AIWRYLAKFATPKYAIVVIIATIA 422

Query: 441 MAAGGYAVSLHLKVGDLDAGAPELRADSRYNRDNAFVTRHYGASSDVFAVMVRTAPGGCS 500
           +   G   +  +K+GDL  GAP L  DSRYN D  F+T H+  ++DV  V+V  +P  C+
Sbjct: 423 LYFAGLEKANQMKIGDLQGGAPALHQDSRYNLDTFFITDHFSITTDVMTVIVEASPEACT 482

Query: 501 AYGTLKHVDDLDWQLRGLQGVDSTNSLALLNRRVLVGLSEGSPKWYDLVNNQATLNMVTA 560
            +  L  +D+ +W +R   GV+ST SLA + ++V  G +EG+P+W  L    A+L     
Sbjct: 483 YHDVLNQIDEFEWLVRNTPGVESTVSLASVAKKVNAGFNEGNPRWEVLPRTTASLVQAIG 542

Query: 561 GAPR--GLYNDDCSLLTLYAYLTDHKADTLARVVDSVQAFAQANDSEQASFLMAAGSAGI 618
             P   GL N DCS++ +Y ++ DHKA+T+  VV  V+A A   D+++  F +A+G  G+
Sbjct: 543 QIPTTSGLLNGDCSVMPVYLFMKDHKAETIETVVAKVKAVAAKMDNDKLQFKLASGPVGV 602

Query: 619 EAATNQVVKQANRDMLWWVYGAVIVLCLVTFRSWRAVLCAVLPLVLTSILCEALMVALGI 678
            AATN+ V +A   M+ +VYGAV VLCL++F+S++A +  ++PL + S L +ALM  L I
Sbjct: 603 MAATNEAVAEAQLPMMIYVYGAVFVLCLISFKSFKATVAVIIPLYVVSTLAQALMTMLNI 662

Query: 679 GVKVATLPVIALGVGIGVDYALYVMSIVLAQLRQGASLSQAYYRALLFTGKVVMLTGITL 738
           G+ V+TLPVIALGVGIGVDY +Y++S + ++L  G  + QAYY AL+  G  V+ TG+TL
Sbjct: 663 GLAVSTLPVIALGVGIGVDYGIYILSTMSSKLSNGMPVQQAYYEALVERGSAVIFTGLTL 722

Query: 739 AIGVGTWIFSPIKFQADMGVLLAFMFVWNMVGALILLPALA 779
           AIGV TW FS +KFQ DMG+LL FMF+ NM+GA+I+LPALA
Sbjct: 723 AIGVSTWFFSALKFQMDMGILLTFMFLVNMLGAIIILPALA 763