Pairwise Alignments

Query, 754 a.a., GGDEF domain protein from Pseudomonas putida KT2440

Subject, 886 a.a., Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) (NCBI) from Rhodospirillum rubrum S1H

 Score =  289 bits (739), Expect = 5e-82
 Identities = 167/444 (37%), Positives = 247/444 (55%), Gaps = 3/444 (0%)

Query: 291 EAFDALEHAQQVNQQLIVRLEDEHRRSSHAAATDHLSGLHNRRQFVEVASQVLTRQRGKR 350
           +A   L H   V++ +  R + E R   + +  D L+ L NR  F +   Q + + R   
Sbjct: 415 DASGRLSHLVAVDEDVTARKKAEER-IRYLSNYDTLTRLPNRVLFRDRLYQAVVQARRGH 473

Query: 351 RLMAILFIDMDRFKSINDSLGHKIGDLLLQAVAGRIQRLLEPGDEASRFGGDEFVVLLAG 410
             +A++FID+D+F  +ND+LGH  GD LL  +A RI    E  D  +R GGDEF ++   
Sbjct: 474 GGLAVMFIDLDQFSLVNDTLGHAAGDHLLMTIASRINAAAEEADTVARVGGDEFALIQTA 533

Query: 411 ERSEEQINAWVHELVQKLSATYALDGQEVNTSPSVGVSICPRDGQDIDSLIRSADAAMYS 470
             S +   +    L+  +     L G+EV    +VG++I P+DG D D+L+++AD AMY 
Sbjct: 534 LTSADSAASLARRLIDVIRTPVDLGGREVVIGANVGIAIYPQDGTDPDNLMKNADMAMYR 593

Query: 471 AKQAGRAQFRFFDPSLNLADIQAFTLEQAFGSAL-AERQFVLHYQPQMRLDTHQVQGYEA 529
           A ++G     FF   +N       +LE+    AL +  Q  LHYQ Q  +++ +  G EA
Sbjct: 594 AVKSGDDSCCFFSNEMNAEAAVRLSLEEDLRRALDSGDQLFLHYQLQFCIESGRPVGAEA 653

Query: 530 LVRWDHPEFGLLYPDRFIDLAERSGFIVELGWEVLQLACEALSSWDAQG-RKTRLAVNVS 588
           L RW HP  G + P RFI +AE SG I+ LG  VL  A    + W A G  +  +AVN+S
Sbjct: 654 LARWTHPTLGAIPPTRFIPVAEDSGLILALGDWVLGTALAEYARWRAAGCGRLTIAVNMS 713

Query: 589 ALQLRQADFADRLLSKLQHHGIAPQQLELEITETTILDPEGTAVAHLHTLRGAGLGISLD 648
           A+Q RQ    +R+   L  HG+ P+ LELE+TE+ ++     AVA L  L  AG+ +S+D
Sbjct: 714 AVQFRQKGLVERVTDLLAQHGVPPEDLELELTESMLMQDADQAVAQLTALSQAGIRLSID 773

Query: 649 DFGRGYAGFAHLHSLPLSKLKIDRSLIAALSNSHDDSPIVSSTIILAKRLGLEVVAEGVE 708
           DFG GY+   +L    + KLK+D+S +  ++   +D+ I  + I L   LGLEV+AEGVE
Sbjct: 774 DFGTGYSSLGYLKLFRVDKLKVDQSFVRDVTEDGNDAVIARAIINLGHSLGLEVIAEGVE 833

Query: 709 TREQVVYLKLAGCDIAQGYHFSRP 732
           T EQ+ YL+  GCD+ QGY  + P
Sbjct: 834 TPEQMAYLRREGCDVVQGYLMAYP 857