Pairwise Alignments

Query, 754 a.a., GGDEF domain protein from Pseudomonas putida KT2440

Subject, 972 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein from Dechlorosoma suillum PS

 Score =  325 bits (833), Expect = 7e-93
 Identities = 179/421 (42%), Positives = 251/421 (59%), Gaps = 1/421 (0%)

Query: 319 HAAATDHLSGLHNRRQFVEVASQVLTRQRGKRRLMAILFIDMDRFKSINDSLGHKIGDLL 378
           H A  D L+GL NRR F +     L +    RR +A+L +D+DRFK++ND+LGH  GDLL
Sbjct: 536 HLAYHDPLTGLPNRRLFYDRLENALRQAHRSRRKLAVLLLDLDRFKAVNDTLGHDQGDLL 595

Query: 379 LQAVAGRIQRLLEPGDEASRFGGDEFVVLLAGERSEEQINAWVHELVQKLSATYALDGQE 438
           L+ V  R+   L  GD  +R GGDEFV+LL    S E  +    +L+ +      L  +E
Sbjct: 596 LKEVGARLSLCLREGDTLARLGGDEFVLLLPEVLSAEDASIVAGKLLAQFDQPVRLGERE 655

Query: 439 VNTSPSVGVSICPRDGQDIDSLIRSADAAMYSAKQAGRAQFRFFDPSLNLADIQAFTLEQ 498
           +  S S+G+++ P DG+D +SL++ AD AMY+AK  GRA +RFF  S N   ++   LE 
Sbjct: 656 IFASTSIGIALYPADGEDGESLLKHADVAMYAAKDGGRAAYRFFIASHNERSLERLELEN 715

Query: 499 AFGSALAERQFVLHYQPQMRLDTHQVQGYEALVRWDHPEFGLLYPDRFIDLAERSGFIVE 558
               A+   Q +L+YQPQ+   + ++ G EALVRW HP  GL+ PD FI LAE +G I  
Sbjct: 716 DLRRAVEGEQLLLYYQPQIGASSGRIAGVEALVRWRHPTRGLVMPDSFIALAENAGLIDA 775

Query: 559 LGWEVLQLACEALSSWDAQGRKT-RLAVNVSALQLRQADFADRLLSKLQHHGIAPQQLEL 617
           +G   L  AC  L +W  QG    R+AVNVSA QLR+ DFA  +L  +   GI P  LEL
Sbjct: 776 IGHWCLVAACRQLRAWQEQGVPVPRVAVNVSARQLRRWDFAQEVLQVVTQSGIDPAGLEL 835

Query: 618 EITETTILDPEGTAVAHLHTLRGAGLGISLDDFGRGYAGFAHLHSLPLSKLKIDRSLIAA 677
           E+TE+++ D     +A   TLR AG+ +S+DDFG GY+  ++L   P+ ++KIDRS ++ 
Sbjct: 836 ELTESSLADDPEQILAIFSTLRQAGVRVSIDDFGTGYSSLSYLSRYPVDEVKIDRSFVSR 895

Query: 678 LSNSHDDSPIVSSTIILAKRLGLEVVAEGVETREQVVYLKLAGCDIAQGYHFSRPLSLAQ 737
           L +  +   +V + I+LA  LG+  VAEGVET  Q   L    CD  QGY FS+P+   Q
Sbjct: 896 LLDDREARSVVRAVILLAHGLGMRTVAEGVETEAQWQVLSDLDCDELQGYLFSKPVPPHQ 955

Query: 738 L 738
           +
Sbjct: 956 I 956



 Score = 26.9 bits (58), Expect = 0.005
 Identities = 27/112 (24%), Positives = 44/112 (39%)

Query: 283 LRLLRKRQEAFDALEHAQQVNQQLIVRLEDEHRRSSHAAATDHLSGLHNRRQFVEVASQV 342
           L+L  ++ + +DA+  A +    L+ RL+ E +R    A T  L+    +R+ +E   Q 
Sbjct: 60  LKLRHRQLQDYDAVAAADERISALLQRLQAELQRHGSEAMTPVLALWQEKREGLERFKQQ 119

Query: 343 LTRQRGKRRLMAILFIDMDRFKSINDSLGHKIGDLLLQAVAGRIQRLLEPGD 394
               R  +     L   + R     D  G      LL  V   I   L  G+
Sbjct: 120 NALLRNSQDHFLNLSSQLLRASDSPDGRGSVPHSALLATVGREIMEFLIRGE 171