Pairwise Alignments

Query, 316 a.a., Site-specific recombinase, phage integrase family from Pseudomonas putida KT2440

Subject, 385 a.a., integrase-like protein from Sinorhizobium meliloti 1021

 Score = 80.1 bits (196), Expect = 8e-20
 Identities = 77/262 (29%), Positives = 110/262 (41%), Gaps = 30/262 (11%)

Query: 53  HAVSTLRQRLAA---LSQWHVAQG-FPDPTKAPLVRQVLRGIRTLHPTPPKQAAPL-LLQ 107
           HA  T+++RL +   L++W    G F  P+    +R  +R          K+A  L +L 
Sbjct: 129 HAPGTVQRRLTSWSILTRWRGLSGAFGAPSLKSALRLAVRASNRPRQRKSKKAVTLDILT 188

Query: 108 HLQTAVTCFEEEARQAREHHDLAALRRARRDSALLLLGFWRGFRG-DELARLRIEHIQAQ 166
            L  A  C  +    AR             D ALLL  F  G R   E+A LR+E +  +
Sbjct: 189 KLLEA--CAGDRLVDAR-------------DRALLLAAFASGGRRRSEVAALRVEDLADE 233

Query: 167 AGVGITLFLPRSK---------GDREALGVQHRTPALKALCPVTAYLQWLEVAGIAHGPV 217
             V        S          G  +          L    PVT   +WL  A I  GPV
Sbjct: 234 EPVRANPADENSPPLPCLSIRLGRTKTTTADENEHVLLIGRPVTVLKRWLSDAQIKDGPV 293

Query: 218 FRKLDRWGNLGDNALNSNSLVGLLRRMLERAGVPAALYTGHSLRRGFATWATANGWELKS 277
           FR++D+WGN+   AL   S+  +L+   E+AG+  AL++ H LR G+ T A   G  L  
Sbjct: 294 FRRIDQWGNIDRRALTPQSVNLVLKARCEQAGLDPALFSAHGLRSGYLTEAANRGIPLPE 353

Query: 278 LMSYVGWKDAKSALRYIDSAQR 299
            M     K    A  Y ++A+R
Sbjct: 354 AMQQSLHKSVTQAASYYNNAER 375