Pairwise Alignments

Query, 389 a.a., conserved protein of unknown function from Pseudomonas putida KT2440

Subject, 379 a.a., CdaR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

 Score =  182 bits (462), Expect = 1e-50
 Identities = 119/380 (31%), Positives = 196/380 (51%), Gaps = 21/380 (5%)

Query: 28  LDHDLAQDIVDRAMAILPCNVNVMDSQGLILGSGEPERINTRHEGAQLVLANGRIVELDT 87
           LD  LAQ IVDR MAI+  N+NVM+  G+I+GSGE  RI   H+GA L L +G  VEL  
Sbjct: 3   LDSQLAQQIVDRTMAIIGYNINVMNQAGVIIGSGEKNRIGQVHDGAILALKHGDSVELTA 62

Query: 88  DAAKCLKGVQPGVNLPLMLDGRLMGVLGLTGDPQQVRTYGELVRMTAEMLLAQRNLQADQ 147
           ++   LKGV+PG+N+ L    +++G++G+TG+P+ +R +  LV+M+AEM++ Q  L    
Sbjct: 63  ESCVALKGVKPGINMVLRNQQQVVGIVGITGEPKDIRDFANLVKMSAEMIIEQAALVEQL 122

Query: 148 QWRRQRCDDLLALLLGGSGNSPRLLDEARQLGLKPQLPRIPCLFEITSGPPAEAL----- 202
           QW R+  ++ ++  +  + ++  L   A +L +    PR+  +         ++L     
Sbjct: 123 QWDRRHREEFISAWIHNTLSAAELDAWAARLSIDLSKPRVAVVIAFRQPKSGQSLDQIRQ 182

Query: 203 -AAWLMSRYPDSWCVSPARQSLLWCRPAGV---------ALDELRLLERLQRH---GWDI 249
               L     D+     + Q ++  +P            +L   +L+ RL+ +   G+DI
Sbjct: 183 VVELLEHPERDNLVAVVSMQEIVVLKPCRTPEHWTSEYESLRIDKLMARLKAYDITGYDI 242

Query: 250 ERLALGSAAQSLEQLRRGYRRVRDLLAYGREVLPSERLLSLQRYRLPALLWRHRNDDALD 309
              ALG    +   +   Y+  + +L  G+   P ++    +  RLP LL         +
Sbjct: 243 ---ALGQLFINPNAIHLSYQSAKQVLRIGQVRQPEKQKHLYEELRLPVLLLPLNEGWQGE 299

Query: 310 ELLEPLQRIRAKDSSGQLLATLRAWCAHDGQSQSCADALGIHRNSLRYRLERIAELGEVD 369
           +    +Q ++ +D SGQL+ TL+   A +G    CA  L IHRN+LRYRLE+I E+  ++
Sbjct: 300 QWRRVMQELQTQDKSGQLVKTLKGLFAANGNLNLCAQQLFIHRNTLRYRLEKITEITGIE 359

Query: 370 PLRLEGMLSLYLGLQLLPTD 389
              L G+  LY+  QL   D
Sbjct: 360 TNSLLGLAELYIAYQLTSYD 379