Pairwise Alignments

Query, 303 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

Subject, 298 a.a., Transcriptional regulator, LysR family, in formaldehyde detoxification operon from Pseudomonas fluorescens FW300-N2E2

 Score =  182 bits (462), Expect = 8e-51
 Identities = 101/291 (34%), Positives = 167/291 (57%), Gaps = 5/291 (1%)

Query: 1   MEPNRFGDIAAFVSAAKAGSFTAAAASLGLTRSAVGKSIARLEARMAVRLLNRTTRKLSL 60
           M  NR+  I  FV+ A+   FTAAA  LG++ S + + I RLE R+  RLL R+TR+++L
Sbjct: 1   MSENRWEGIDEFVAVAECSQFTAAAERLGVSSSHISRQIVRLEERLQTRLLYRSTRRVTL 60

Query: 61  TDEGLVAFERWRQILDDLDEVESTMALRRGKPTGTLRLTAPLSLGQRHVLPVLDQYLKQW 120
           T+ G    +  +++ D  +E    +     +P G LR+T  ++ G+R ++P++ +++  +
Sbjct: 61  TEAGQTFLQHCQRLQDGREEALRAVGDLASEPKGMLRMTCAVAYGERFIVPLVTRFMGLY 120

Query: 121 PELRADIRFTDRFVDLVEEGVDVAVRIGAPKEDSQLLTRTVAWQQFVTCASPAYLEKRGV 180
           P+LR DI  ++R +DLV E +D+A+R+G   +DS+L+   +A ++   CASP+YLE+ G 
Sbjct: 121 PQLRVDIELSNRPLDLVHESLDLAIRLGR-LQDSRLVATRLAPRRMYLCASPSYLERYGR 179

Query: 181 PQIPGDLYGHDKITFLAGEKAMPWRFHTEAGLHLCEDPGRLNIDSSEAMLDGARAGFGLI 240
           P    +L  H+    L G   + W+             G    +S +A+LD A  G GL 
Sbjct: 180 PHSLSELSRHN---CLIGSSDI-WQLEQNGREFSQRVQGNWRCNSGQAVLDAALQGVGLC 235

Query: 241 HLPTYITGDDLRAGNLVEVLHAYRPPADPIRIVYPSKRHLSPRVRGFIDLL 291
            LP Y   + L +G L+ +L A++PP   +  +YP +RHLSP+VR  +D L
Sbjct: 236 QLPDYYVLEHLHSGALISLLEAHQPPNTAVWALYPQQRHLSPKVRKLVDYL 286