Pairwise Alignments

Query, 303 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

Subject, 305 a.a., LysR family transcriptional regulator from Rhodopseudomonas palustris CGA009

 Score =  205 bits (521), Expect = 1e-57
 Identities = 120/292 (41%), Positives = 170/292 (58%), Gaps = 3/292 (1%)

Query: 4   NRFGDIAAFVSAAKAGSFTAAAASLGLTRSAVGKSIARLEARMAVRLLNRTTRKLSLTDE 63
           +R   + AFV+ A    F  AA  LGL+ SAV + +A LE R+  RLL RTTR ++LTD 
Sbjct: 2   DRLDTMTAFVAVADLQGFAPAARKLGLSPSAVTRMVAALEERLGTRLLQRTTRSVALTDT 61

Query: 64  GLVAFERWRQILDDLDEVESTMALRRGKPTGTLRLTAPLSLGQRHVLPVLDQYLKQWPEL 123
           G    ER R+IL D++E +++ A  R  P+G L ++AP+  G+RHV P+L  YL+++PE+
Sbjct: 62  GARYLERMRRILADIEEADTSAAAERVTPSGRLVVSAPVGFGRRHVAPLLSDYLRRYPEV 121

Query: 124 RADIRFTDRFVDLVEEGVDVAVRIGAPKEDSQLLTRTVAWQQFVTCASPAYLEKRGVPQI 183
             ++R +D  ++LVE+GVD AVRIG    DS L+ R +   + +  ASPAYL  RGVP +
Sbjct: 122 TGELRLSDLMINLVEDGVDCAVRIG-HLSDSSLVARQLGAMRRIVVASPAYLAARGVPAM 180

Query: 184 PGDLYGHDKITFLAGEKAMPWRFHTEA-GLHLCEDPGRLNIDSSEAMLDGARAGFGLIHL 242
           P ++  HD I F      + W F  +   + +   P  ++  +  A+LD  R G GL  +
Sbjct: 181 PAEIATHDVIHFGQTGAPVGWHFVVDGRDVRIACTPRLVSNVADVAILDAERGG-GLTRV 239

Query: 243 PTYITGDDLRAGNLVEVLHAYRPPADPIRIVYPSKRHLSPRVRGFIDLLVAT 294
             Y   D + AG L  VL  Y  P  PI IVYP+ R LS +VR FIDL   T
Sbjct: 240 LAYQAADAIAAGRLQIVLANYEVPPLPIAIVYPTSRLLSAKVRAFIDLAAET 291