Pairwise Alignments

Query, 303 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

Subject, 302 a.a., transcriptional regulator, LysR family (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  184 bits (466), Expect = 3e-51
 Identities = 105/292 (35%), Positives = 169/292 (57%), Gaps = 6/292 (2%)

Query: 4   NRFGDIAAFVSAAKAGSFTAAAASLGLTRSAVGKSIARLEARMAVRLLNRTTRKLSLTDE 63
           +R  ++ AF +    G FT AA  +G+++SAV K ++ LEAR+  RLLNRTTR++S T+ 
Sbjct: 2   DRLTEMEAFATVVDQGGFTDAARKMGISKSAVSKHVSSLEARLGARLLNRTTRRVSPTEI 61

Query: 64  GLVAFERWRQILDDLDEVESTMALRRGKPTGTLRLTAPLSLGQRHVLPVLDQYLKQWPEL 123
           GL  ++R R +L+D  E ++ +   + +P G LR++     G +H+ PVL  +L Q+PE+
Sbjct: 62  GLAYYDRARHVLNDAGEADAMVNAMQSEPNGLLRISVATDFGVKHLSPVLAGFLHQFPEI 121

Query: 124 RADIRFTDRFVDLVEEGVDVAVRIGAPKEDSQLLTRTVAWQQFVTCASPAYLEKRGVPQI 183
           + ++   +R+V+L+ EG D+A+R+G   EDS L  R +A       A+P+YLEK G P+ 
Sbjct: 122 QINMVLNNRYVELISEGFDLALRVG-DLEDSTLRARKLATTSKRMIAAPSYLEKFGHPKR 180

Query: 184 PGDLYGHDKITFLAGEKAMPWRFHTEAG-LHLCEDPGRLNIDSSEAMLDGARAGFGLIHL 242
             DL  H  + +        W+    +G        G L ++  +++L+ A+ G G+ +L
Sbjct: 181 IDDLSDHKLLHYSNQSSGNLWKITAPSGEKRQVRTGGWLTVNDGQSLLNAAKTGLGIAYL 240

Query: 243 PTYITGDDLRAGNLVEVLHAYRPPADPIRI--VYPSKRHLSPRVRGFIDLLV 292
           P+++  D L  G++VEVL     P D + I  VYP  R   P+VR FID LV
Sbjct: 241 PSFLFEDALGRGDVVEVLPDL--PYDDLGIYAVYPPGRFTQPKVRAFIDFLV 290