Pairwise Alignments

Query, 336 a.a., benzoate 1,2-dioxygenase electron transfer component from Pseudomonas putida KT2440

Subject, 408 a.a., NADH:ubiquinone reductase (Na(+)-transporting) subunit F from Vibrio cholerae E7946 ATCC 55056

 Score = 98.2 bits (243), Expect = 3e-25
 Identities = 81/340 (23%), Positives = 150/340 (44%), Gaps = 57/340 (16%)

Query: 43  GACGTCKCKAESGRYDLGDNFIEDALSEDEIAEGYVLTCQMRAESDCVIRIPASSQLCKT 102
           G+CG C+ K +SG  D+    + D +S+ E  EG  L CQ+  ++D  + +P      K 
Sbjct: 74  GSCGQCRVKIKSGGGDILPTEL-DHISKGEAREGERLACQVAVKADMDLELPEEIFGVKK 132

Query: 103 EQATFEAAISDVRQLSVSTIALSIK-GEALSRLAFLPGQYVNLKVPGSEQS--------- 152
            + T  +  +D +   +  + L+I  GE++    F  G Y+ ++ P              
Sbjct: 133 WECTVIS--NDNKATFIKELKLAIPDGESVP---FRAGGYIQIEAPAHHVKYADFDVPEK 187

Query: 153 ----------------------RAYSFSSLQKD-GEVSFLIR---------NVPGGLMSS 180
                                 RAYS ++  ++ G +   +R         NVP G MSS
Sbjct: 188 YRGDWDKFNLFRYESKVDEPIIRAYSMANYPEEFGIIMLNVRIATPPPNNPNVPPGQMSS 247

Query: 181 FLTNLAKAGDSLSLAGPLGSFYLRPIQRPLLLLAGGTGLAPFTA-MLEKIAEQGSEHPLH 239
           ++ +L KAGD  +++GP G F+ +     ++ + GG G+AP  + + +++    S+  + 
Sbjct: 248 YIWSL-KAGDKCTISGPFGEFFAKDTDAEMVFIGGGAGMAPMRSHIFDQLKRLKSKRKMS 306

Query: 240 LIYGVTNDFDLVELDRLQALAARIPNFTYSACVANP---DSQYPQKGYVTQHIEPRHLND 296
             YG  +  ++  ++    LAA   NF +   +++P   D+     G++   +   +L D
Sbjct: 307 YWYGARSKREMFYVEDFDGLAAENDNFVWHCALSDPQPEDNWTGYTGFIHNVLYENYLKD 366

Query: 297 ----GDVDVYLCGPPPMVEAVSQYVREQGITPANFYYEKF 332
                D + Y+CGPP M  AV   ++  G+   N   + F
Sbjct: 367 HEAPEDCEYYMCGPPMMNAAVINMLKNLGVEEENILLDDF 406