Pairwise Alignments

Query, 336 a.a., benzoate 1,2-dioxygenase electron transfer component from Pseudomonas putida KT2440

Subject, 418 a.a., Na(+)-translocating NADH-quinone reductase subunit F (RefSeq) from Shewanella sp. ANA-3

 Score = 90.1 bits (222), Expect = 9e-23
 Identities = 77/340 (22%), Positives = 150/340 (44%), Gaps = 57/340 (16%)

Query: 43  GACGTCKCKAESGRYDLGDNFIEDALSEDEIAEGYVLTCQMRAESDCVIRIPASSQLCKT 102
           G+CG C+   +SG  D+    + D +S+ +  +G  L+CQ+  ++D  I +       K 
Sbjct: 84  GSCGQCRVVVKSGGGDILPTEL-DHISKGDARKGCRLSCQVNVKNDMEIELDEEIFGIKK 142

Query: 103 EQATFEAAISDVRQLSVSTIALSIK-GEALSRLAFLPGQYVNLKVPG------------- 148
            + T  +  +D +   +  + L I  GE++    F  G Y+ ++ P              
Sbjct: 143 WECTVIS--NDNKATFIKELKLQIPDGESVP---FRAGGYIQIEAPAHHVKYADFDVPAK 197

Query: 149 ------------------SEQSRAYSFSSLQKD-GEVSFLIR---------NVPGGLMSS 180
                              E  RAYS ++  ++ G +   +R         ++P G MSS
Sbjct: 198 YRGDWEHFGFFKLESKVDEETIRAYSMANYPEEFGIIMLNVRIATPPPRNLSLPCGKMSS 257

Query: 181 FLTNLAKAGDSLSLAGPLGSFYLRPIQRPLLLLAGGTGLAPFTA-MLEKIAEQGSEHPLH 239
           ++ +L KAGD ++++GP G F+ +     ++ + GG G+AP  + + +++    S+  + 
Sbjct: 258 YIWSL-KAGDKVTISGPFGEFFAKDTDAEMVFIGGGAGMAPMRSHIFDQLKRLKSKRKMS 316

Query: 240 LIYGVTNDFDLVELDRLQALAARIPNFTYSACVANP---DSQYPQKGYVTQHIEPRHLND 296
             YG  +  ++  ++    LAA   NF +   +++P   D+     G++   +   +L D
Sbjct: 317 FWYGARSKREMFYVEDFDGLAAENDNFVWHVALSDPQPEDNWDGYTGFIHNVLYENYLKD 376

Query: 297 ----GDVDVYLCGPPPMVEAVSQYVREQGITPANFYYEKF 332
                D + Y+CGPP M  AV   ++  G+   N   + F
Sbjct: 377 HEAPEDCEFYMCGPPMMNAAVIGMLKNLGVEDENILLDDF 416