Pairwise Alignments

Query, 318 a.a., BenABC operon transcriptional activator from Pseudomonas putida KT2440

Subject, 317 a.a., AraC-type DNA-binding domain-containing proteins from Pseudomonas stutzeri RCH2

 Score =  396 bits (1018), Expect = e-115
 Identities = 187/313 (59%), Positives = 239/313 (76%)

Query: 4   RLLSERSSVFHHADPYAVSDYVNQHVGQHCIGLSRTTHPQASLSHRKFAELDLCRISYGG 63
           RLLS++S +F HADP+AVSDYVNQHVG HCI L RT  PQASLSH KF +LDLC+ISYGG
Sbjct: 3   RLLSDKSRIFEHADPHAVSDYVNQHVGSHCIRLPRTGSPQASLSHCKFGKLDLCQISYGG 62

Query: 64  SVRVTSPALETIYHLQVLLNGNCLWRGHKREQHLVPGELLLINPDDPVDLTYSEDCEKFI 123
           SV VTSPALETI+HLQ+L  G+CLWRG  +E +  PGELLLINPDDPVDLTYS+DCEK I
Sbjct: 63  SVHVTSPALETIFHLQLLQRGHCLWRGRGQEHYFTPGELLLINPDDPVDLTYSDDCEKLI 122

Query: 124 LKVPTRLLDSICDEQRWQRPDGGVRFLRNHYRLDELDGFVNLLAMVCHEAEVSDSLPRVQ 183
           +K+P   L+  C E +WQ P  G+RF  N + L +LDGF +L++++C EA    S+P++Q
Sbjct: 123 VKLPASFLEKACGENQWQAPADGIRFSANRHALKDLDGFDSLVSLICREAGSEQSIPQIQ 182

Query: 184 GHYSQIVASKLLTLMSTNIRRESLSAPQAGLERILDYIERNLKLELSAEVLAEQACMSLR 243
             YS+I+ASKLL  +++NIRR+          R+ DYI+ +LK ++S E LA  A MSLR
Sbjct: 183 EQYSRIIASKLLFSLASNIRRDPFGDSCPSFGRLTDYIDEHLKKDISVEQLATLANMSLR 242

Query: 244 SLYALFDQHLGITPKHYVRQRKLERVHACLSDPTCGVRSVTELALDYGFLHLGRFSEIYR 303
           SLY LF++ +G TPK Y+RQRKLE++H  LSDP+  VR++TE+A+DYGF+HLGRFSE Y+
Sbjct: 243 SLYLLFERKVGTTPKSYIRQRKLEQIHGRLSDPSAKVRNITEIAMDYGFMHLGRFSESYK 302

Query: 304 QQFGELPSQTFKR 316
             FGELPS T +R
Sbjct: 303 STFGELPSDTLRR 315