Pairwise Alignments

Query, 296 a.a., Universal stress protein family from Pseudomonas putida KT2440

Subject, 310 a.a., universal stress protein UspE (RefSeq) from Shewanella amazonensis SB2B

 Score =  117 bits (292), Expect = 4e-31
 Identities = 86/306 (28%), Positives = 148/306 (48%), Gaps = 20/306 (6%)

Query: 1   MSQFKRLFVMLGPQMRHTPALQRAAALAESSGALLDINVFVDDVD---TFGLMSDGRE-- 55
           M ++K+L V++ P     PAL+RA ALAE + A + + + + D     T  L +  RE  
Sbjct: 1   MKEYKKLLVVVDPTKDKQPALERAVALAEKNQASITVFLSIFDFSYEMTSILSAHEREAM 60

Query: 56  RERLLSDNRQWLADEAEQLSDAGVDVSTELLLTRDPLGSVLERVERLGCDLLVKDVQHEP 115
           R+ ++     WL D        G+D+ T+++    P  S++      G DL+VK      
Sbjct: 61  RKGVIDQRVAWLGDLIAPFIQDGIDIQTQVVWHNRPFESIINYAIEGGFDLIVKGTHEHD 120

Query: 116 VLKRLLVTPLDWQLLKDSPVAVHLVSDIRLPLPRQIAATVDLNSHGAGEH--LDEQVIHC 173
            LK ++ TP DW L++ +PV V LV +   P+  +I   V++ +    EH  L+ +VI  
Sbjct: 121 KLKAVIFTPTDWHLMRKAPVPVLLVKEHDWPVGGKILCAVNVATEDP-EHQALNGKVIEY 179

Query: 174 AHDLALQCNAELHLLHVCDAAKTHIADFGAGTVTMPGFDS-----SVRTAQRAAFNRLGD 228
           A +LA Q +A++HL++       ++A      + +P FD+     S+R         L  
Sbjct: 180 AQNLAAQFDAKVHLVNGYPGTPVNLA------IELPDFDAHSYNESIRMQHEQRVQYLAT 233

Query: 229 HHQIPLERRHFLEGAAIRAIAQFVGHNRVDVIVMGS-HRHDAMQTFLGGTTAHVLEHPLC 287
            + IP+E  H  EG     I +       +++++G+  R       +G T  HV++   C
Sbjct: 234 SYGIPVEACHVKEGLPEDVIPELAVDLDAELVILGTVGRTGLSAALIGNTAEHVIDSLNC 293

Query: 288 NVLAIK 293
           ++LAIK
Sbjct: 294 DLLAIK 299