Pairwise Alignments

Query, 288 a.a., putative DNA-binding transcriptional regulator, LysR-type from Pseudomonas putida KT2440

Subject, 299 a.a., Cyn operon transcriptional activator from Pseudomonas fluorescens FW300-N2E2

 Score = 83.2 bits (204), Expect = 6e-21
 Identities = 55/203 (27%), Positives = 95/203 (46%), Gaps = 6/203 (2%)

Query: 6   LEIFKAVAEQGSISAAAQHIHRVPSNLTTRIKQLEEDLGVELFIREKSRLRLSPAGWNFL 65
           ++ F AVAE  S + AA  +H     L+ +++QLEE LG +LF R     RL+ AG  +L
Sbjct: 10  VQYFLAVAEHLSFTKAAAALHVSQPALSQQVRQLEESLGAQLFDRSGRTTRLTDAGDVYL 69

Query: 66  EYTRRILDLVHEARLTV--AGEDPQGTFALGSLESTAAVRIPALLAAYNQRYPKVDLDLS 123
            Y RR    + EA+  +    +  +G+  L    +     +  ++ A++ RYPK+ L+L 
Sbjct: 70  LYARRAYQQLREAKSAIHDVSDLTRGSLRLAVTPTFTTYLVGPVIKAFHSRYPKITLNLK 129

Query: 124 TGPSGTMLEGVLSGRLVAAFVDGPVLHPTLEGIPVFEEEMMVIAPLNHTPVTR----AQD 179
                 + E +L+G L A      +  P ++ IP+  E + ++    H          QD
Sbjct: 130 EISQERIEELLLAGELDAGIAFDEINTPNIDAIPLLNETLALVVSRQHRLAEERSIGLQD 189

Query: 180 VNGESIYAFRANCSYRHHFENWF 202
           +N ES+       + R   + +F
Sbjct: 190 LNAESLILLSPEFATREQIDRYF 212