Pairwise Alignments

Query, 349 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

Subject, 278 a.a., transcriptional activator RhaS from Klebsiella michiganensis M5al

 Score = 53.1 bits (126), Expect = 8e-12
 Identities = 63/232 (27%), Positives = 98/232 (42%), Gaps = 19/232 (8%)

Query: 114 QFFRAPSGSLAFCFDRSENSLYLLNEQSRNIWITPENYQEVAVVFDQAFLARHGLD---P 170
           Q +    GS+ F  D   +    L E + N+ +T   Y+        AF    GL+   P
Sbjct: 53  QPYTISGGSVCFIRDHDRH----LYEHTDNLCLTNVLYRA-----PDAFRFLSGLNALLP 103

Query: 171 QRLEGLFMVPLGSGQNALFGSWLSATLTRLGEEGCPLQGQALAEQLLEDCLFILDNASQR 230
           Q  EG ++      Q+AL    +   + ++ E G      A+A +   + LF+      R
Sbjct: 104 QEQEGNYLSHWRVNQSAL--QQVRQIVEQMEEVGADADMHAIASR---EILFMQLLVHLR 158

Query: 231 LQGVALGRRDEERAIMHRVSEWAADCPEETLNLLELADVAGVSLRQLQQAFKAFTGMPPA 290
              +A G  D E  + H ++ W  D   E +   E+A    +SLR L +  K  TG+ P 
Sbjct: 159 KSSLAEGASDNEARLNHLMA-WLEDHFAEDICWEEVAARFSLSLRTLHRQLKQQTGLTPQ 217

Query: 291 HWLRLRRLNGARRDLLRGGGVTVAEVAMRWSFWHLGRFSESYRQLFKEFPSE 342
            +L   RL  AR  LLR    +V ++A R  F     FS  +R+ F   P +
Sbjct: 218 RYLNRVRLMKARH-LLRHSDDSVTDIAYRCGFGDSNHFSTLFRREFAWSPRD 268