Pairwise Alignments

Query, 362 a.a., putrescine-binding periplasmic protein from Pseudomonas putida KT2440

Subject, 375 a.a., Putrescine ABC transporter putrescine-binding protein PotF (TC 3.A.1.11.2) from Pseudomonas fluorescens FW300-N2E2

 Score =  386 bits (991), Expect = e-112
 Identities = 182/336 (54%), Positives = 249/336 (74%), Gaps = 1/336 (0%)

Query: 28  VYNWTDYIGDTTLADFQASSGIKVVYDVFDSNETLEGKLLAGRTGYDVVVPSNHFLARQA 87
           VYNW+DYI   T+A F+  SGIKVVYDVFDSNETLE KLLAG++GYD+VVPSN+FLA+Q 
Sbjct: 40  VYNWSDYIAPDTVAKFEKESGIKVVYDVFDSNETLEAKLLAGKSGYDIVVPSNNFLAKQI 99

Query: 88  QAGAFLPLDRSKLPNWQHLDPKLLKQLEQNDPGNQYAVPYLWGTNGIGYNVDKVKAALGV 147
           +AG +  LD+SKLPNW++L+  LLK +  +DPGN++A PY+WG+ GIG+N +KVKAALG 
Sbjct: 100 KAGVYQKLDKSKLPNWKNLNTDLLKAVSVSDPGNEHAFPYMWGSIGIGFNPEKVKAALGA 159

Query: 148 DH-IDSWAVLFEPENLKKLKQCGVAFMDSPDELFPAVLNYLGMDPRSEKPGDYAKAEARL 206
           D   +SW +LF+PEN  KLK CG++F+DSP E+ P  L+YLG    S+     A+AEA  
Sbjct: 160 DAPTNSWDLLFKPENAAKLKACGISFLDSPTEMIPVALHYLGYPTDSQDKKQLAEAEALF 219

Query: 207 LELRPYITYFHSSKYVSDLANGDVCIAFGYSGDVFQAANRAVEAKNGVKVAYSIPKEGSN 266
           L++RP I YFHSSKY+SDLANG++C+A GYSGD++QA +RA EA   VKV+Y+IPKEG+ 
Sbjct: 220 LKIRPSIGYFHSSKYISDLANGNICVAVGYSGDIYQAKSRAAEAGGKVKVSYNIPKEGAG 279

Query: 267 LWFDLLAIPKDANNPEQALAFINYLLDPKVIAKVSATVGYANANPDAKAYMDASLVNNPE 326
            +FD++AIPKDA N E A  F+ +L  P+++A+++ TV + N N  +   +   + ++P 
Sbjct: 280 SFFDMVAIPKDAENVEGAYKFMTFLQKPEIMAEITDTVSFPNGNAASTPLVSKEITSDPG 339

Query: 327 IYPPQEVLDKLYISSTPSPKIMRVMTRSWSKIKSNR 362
           IYPP +V  KLY  +       R++TRSW+KIKS +
Sbjct: 340 IYPPADVQAKLYAIADLPAATQRILTRSWTKIKSGK 375