Pairwise Alignments

Query, 362 a.a., putrescine-binding periplasmic protein from Pseudomonas putida KT2440

Subject, 442 a.a., ABC transporter substrate-binding protein from Parabacteroides merdae CL09T00C40

 Score =  140 bits (352), Expect = 9e-38
 Identities = 107/389 (27%), Positives = 182/389 (46%), Gaps = 57/389 (14%)

Query: 18  TTTQAAPTVSVYNWTDYIGDTTLADF------QASSGIKVVYDVFDSNETLEGKLLAGRT 71
           T  + +  + VYNW DYI +  LA+F      Q    I+++Y VFD NE +  K+  G  
Sbjct: 24  TDEERSHILKVYNWADYIDEDVLAEFPAWYKEQTGEDIRIIYQVFDINEIMLTKIERGHE 83

Query: 72  GYDVVVPSNHFLARQAQAGAFLPLDRS--KLPNW-QHLDPKLLKQLEQ-NDPGNQ---YA 124
            +D++ PS + + R  +    +P+DR+  K P++  ++ P +  QL + + PG +   Y 
Sbjct: 84  DFDLICPSEYIIERMLKKNLLVPIDRNFGKTPDYLDNVSPYIRGQLNKLSQPGRKTTDYV 143

Query: 125 VPYLWGTNGIGYNVDKVKAALGVDHIDSWAVLFEPENLKKLKQCGVAFMDSPDELFPAVL 184
           VPY+WGT GI YN   V+       ++SW  L++ +   K     +   DS  + +   +
Sbjct: 144 VPYMWGTAGILYNKQFVEEK----EVESWECLWDSKFRNK-----ILMKDSYRDSYGTAI 194

Query: 185 NYLGMDPRSE------------KPGDYAKAEARLLELRPYITYFHSSKYVSDLANGDVCI 232
            Y       +             P   A AE  L +++P I  + +      +  G   +
Sbjct: 195 IYAHAKELEDGTVTVEQLMNDNSPEAIAIAEELLKKMKPNIAGWEADFGKEMMTKGKAWL 254

Query: 233 AFGYSGDVFQAANRAVEAKNGVKVAYSIPKEGSNLWFDLLAIPKDANNPEQALAFINYLL 292
            F +SGD   A + A     GV++ Y +P+EGSN+W+D  AIPK A N + A  FI+YL 
Sbjct: 255 NFTWSGDAVWAMDEAEAV--GVELDYEVPREGSNIWYDGWAIPKYARNVKAASYFIDYLC 312

Query: 293 DPKVIAKVSATVGY--ANANPD-AKAYMDASLVN-----------------NPEIYPPQE 332
            P V  +    +GY  A A P+  +A +D+++                   NP  YP ++
Sbjct: 313 RPDVALRNMDAIGYVSAIATPEIMEAKIDSTIETVSDLSYFFGPGADSIRINPVQYPDRK 372

Query: 333 VLDKLYISSTPSPKIMRVMTRSWSKIKSN 361
           V+++  +      +   V+   WS++K +
Sbjct: 373 VVERCAMIRDFGDRTELVL-EMWSRVKGD 400