Pairwise Alignments

Query, 362 a.a., putrescine-binding periplasmic protein from Pseudomonas putida KT2440

Subject, 361 a.a., putrescine-binding periplasmic protein PotF from Phaeobacter inhibens DSM 17395

 Score =  353 bits (906), Expect = e-102
 Identities = 171/345 (49%), Positives = 236/345 (68%), Gaps = 1/345 (0%)

Query: 17  ATTTQAAPTVSVYNWTDYIGDTTLADFQASSGIKVVYDVFDSNETLEGKLLAGRTGYDVV 76
           ++    A  V VYNW+DYI +  L  F+  +GI ++YDVFDSNE LE K+LAG +GYDVV
Sbjct: 15  SSAAAVAEEVRVYNWSDYIDEDLLEKFETETGIDLIYDVFDSNELLETKMLAGGSGYDVV 74

Query: 77  VPSNHFLARQAQAGAFLPLDRSKLPNWQHLDPKLLKQLEQNDPGNQYAVPYLWGTNGIGY 136
           VP+  FLARQ QAGAF  LD SKL N  ++   +  +  + DP N Y+V Y+WGT GIG 
Sbjct: 75  VPTGSFLARQIQAGAFQKLDTSKLSNAGNMWDVIEDRTARYDPDNLYSVNYMWGTTGIGA 134

Query: 137 NVDKVKAALGVDH-IDSWAVLFEPENLKKLKQCGVAFMDSPDELFPAVLNYLGMDPRSEK 195
           N  KV+ ALG D  IDS  ++F P+N++KL  CGV F+D+PDE+ PA L Y+G DP S  
Sbjct: 135 NTAKVEEALGADAPIDSLELVFNPDNIEKLANCGVYFLDAPDEMIPAALKYIGEDPNSMD 194

Query: 196 PGDYAKAEARLLELRPYITYFHSSKYVSDLANGDVCIAFGYSGDVFQAANRAVEAKNGVK 255
           P   AKAE  L+ +RPY+  FHSS+Y++ LANGD+C+AFG+SGD+ QA +RA EA NGV+
Sbjct: 195 PDVVAKAEPVLMAIRPYVKKFHSSEYINALANGDICVAFGWSGDILQARDRADEADNGVE 254

Query: 256 VAYSIPKEGSNLWFDLLAIPKDANNPEQALAFINYLLDPKVIAKVSATVGYANANPDAKA 315
           + ++ PKEG+ +WFD +AIP DA NP+ A  F+N++++ + +A  S  V YAN N  ++ 
Sbjct: 255 IVFNAPKEGALMWFDQMAIPVDAPNPDGAHKFLNFIMEAENMAAASNYVYYANGNKASQE 314

Query: 316 YMDASLVNNPEIYPPQEVLDKLYISSTPSPKIMRVMTRSWSKIKS 360
           +++  ++ +P IYP +E L  LYI     PK+ R  TR W+KIKS
Sbjct: 315 FLEEDVIGDPAIYPSEETLKNLYIKEAYPPKVQRKATRMWTKIKS 359