Pairwise Alignments

Query, 362 a.a., putrescine-binding periplasmic protein from Pseudomonas putida KT2440

Subject, 346 a.a., spermidine/putrescine ABC transporter periplasmic substrate-binding protein from Marinobacter adhaerens HP15

 Score =  170 bits (431), Expect = 5e-47
 Identities = 104/351 (29%), Positives = 169/351 (48%), Gaps = 21/351 (5%)

Query: 15  LFATTTQAAPTVSVYNWTDYIGDTTLADFQASSGIKVVYDVFDSNETLEG--KLLAGRTG 72
           L   +++    +++YNW++Y+    L  F   +GI+VVY  +DSNE +    KLL     
Sbjct: 14  LTGCSSEEPQVLNLYNWSEYMPQEVLDRFTEETGIQVVYTTYDSNEAMYARLKLLDDSAA 73

Query: 73  YDVVVPSNHFLARQAQAGAFLPLDRSKLPNWQHLDPKLLKQLEQNDPGNQYAVPYLWGTN 132
           YD+ VPS +++++  Q    LP+DRSK+  + +LDP+L+      DP NQ++VPYLWGT 
Sbjct: 74  YDLAVPSTYYVSKMRQEDLLLPIDRSKIEGFDNLDPELVNL--DIDPENQFSVPYLWGTT 131

Query: 133 GIGYNVDKVKAALGVDHIDSWAVLFEPENLKKLKQCGVAFMDSPDELFPAVLNYLGMDPR 192
           G+  +   ++        D W   F+           V   +   E+F   L  LG    
Sbjct: 132 GLAVDTADIEGEPVTAWEDLWEDRFDGR---------VMLTNDMREVFHVGLRVLGYSGN 182

Query: 193 SEKPGDYAKAEARLLELRPYITYFHSSKYVSDLANGDVCIAFGYSGDVFQAANRAVEAKN 252
           S  P +   A  +L EL P +  F+S         G+  +   ++G+       AV  K+
Sbjct: 183 STNPDEIEAAYEKLAELMPSVRTFNSDAPRMPYLEGEADVGMIWNGE-------AVMGKD 235

Query: 253 GVK-VAYSIPKEGSNLWFDLLAIPKDANNPEQALAFINYLLDPKVIAKVSATVGYANANP 311
            ++ + Y  P+EG   W D   IPK+A NPE A  FI+++L P++ A +S  +GYA  N 
Sbjct: 236 TMESLEYVYPEEGIIAWLDSFVIPKNAKNPEAAHQFISFVLQPEISALISEEIGYATPNL 295

Query: 312 DAKAYMDASLVNNPEIYPPQEVLDKLYISSTPSPKIMRVMTRSWSKIKSNR 362
            A+  +   + NN   YP    +      +      ++V  + W  +KS R
Sbjct: 296 AARDLLPDEVANNRASYPNATDMINAEFQTDIGDDALQVYAKYWEMLKSGR 346