Pairwise Alignments

Query, 362 a.a., putrescine-binding periplasmic protein from Pseudomonas putida KT2440

Subject, 348 a.a., spermidine/putrescine ABC transporter substrate-binding protein PotD from Klebsiella michiganensis M5al

 Score =  181 bits (460), Expect = 2e-50
 Identities = 109/336 (32%), Positives = 171/336 (50%), Gaps = 19/336 (5%)

Query: 2   RHLQALIPAAFTLLFATTTQAAPTVSVYNWTDYIGDTTLADFQASSGIKVVYDVFDSNET 61
           RHL A    A  +  A     + T+  YNWT+Y+    L  F   +GIKV+Y  ++SNET
Sbjct: 6   RHLLAAGALAVGMS-AAHADDSKTLYFYNWTEYVPPGLLEQFTKETGIKVIYSTYESNET 64

Query: 62  LEGKLLAGRTG-YDVVVPSNHFLARQAQAGAFLPLDRSKLPNWQHLDPKLLKQLEQNDPG 120
           +  KL   + G YD+VVPS +F+ +  + G    +D+SKL N+ +LDP++L +    DP 
Sbjct: 65  MYAKLKTYKDGAYDLVVPSTYFVDKMRKEGMLQKIDKSKLSNFGNLDPEMLNK--PFDPN 122

Query: 121 NQYAVPYLWGTNGIGYNVDKVKAALGVDHIDSWAVLFEPENLKKLKQCGVAFMDSPDELF 180
           N Y++PY+WG   IG N D++        + SWA L++PE    L        D   E+F
Sbjct: 123 NDYSIPYIWGATAIGINSDEIDPKT----VTSWADLWKPEYKSSL-----LLTDDAREVF 173

Query: 181 PAVLNYLGMDPRSEKPGDYAKAEARLLELRPYITYFHSSKYVSDLANGDVCIAFGYSGDV 240
              L  LG    +  P +   A   L +L P +  F+S    +    G+V +   ++G  
Sbjct: 174 QVALRKLGYSGNTTDPKEIEAAYNELKKLMPNVAAFNSDNPANPYMEGEVNLGMVWNGSA 233

Query: 241 FQAANRAVEAKNGVKVAYSIPKEGSNLWFDLLAIPKDANNPEQALAFINYLLDPKVIAKV 300
           + A     +A   ++V +  PKEG   W D L+IP +A N + AL  IN+LL P++  +V
Sbjct: 234 WVAR----QAGTPLEVVW--PKEGGIFWMDSLSIPANAKNVDGALKLINFLLRPEIAKQV 287

Query: 301 SATVGYANANPDAKAYMDASLVNNPEIYPPQEVLDK 336
           + T+GY   N  A+  +   + N+  +YP    + K
Sbjct: 288 AETIGYPTPNLAARKMLSPEVANDKSLYPDAATIQK 323