Pairwise Alignments

Query, 362 a.a., putrescine-binding periplasmic protein from Pseudomonas putida KT2440

Subject, 370 a.a., spermidine/putrescine ABC transporter substrate-binding protein PotF from Klebsiella michiganensis M5al

 Score =  417 bits (1073), Expect = e-121
 Identities = 204/362 (56%), Positives = 265/362 (73%), Gaps = 3/362 (0%)

Query: 4   LQALIPAAFTLLFATTTQAAP-TVSVYNWTDYIGDTTLADFQASSGIKVVYDVFDSNETL 62
           L  L+  A   + A +  A   T+ VYNW+DYI   T+A+F+  +GIKVVYDVFDSNE L
Sbjct: 9   LTGLVTGALMAVSAGSLAAEQKTLHVYNWSDYIAPDTVANFEKETGIKVVYDVFDSNEVL 68

Query: 63  EGKLLAGRTGYDVVVPSNHFLARQAQAGAFLPLDRSKLPNWQHLDPKLLKQLEQNDPGNQ 122
           EGKL+AG TG+D+VVPS  FL RQ  AG F PLD+SKLPNW++LDP++LK + ++DP N+
Sbjct: 69  EGKLMAGSTGFDLVVPSASFLERQLAAGVFQPLDKSKLPNWKNLDPEVLKLVAKHDPDNK 128

Query: 123 YAVPYLWGTNGIGYNVDKVKAALGVD-HIDSWAVLFEPENLKKLKQCGVAFMDSPDELFP 181
           YA+PYLW T GIGYN+DKVKA LG D  +DSW ++ +PENL+KLK CGV+F+D+P+E+F 
Sbjct: 129 YAIPYLWATTGIGYNIDKVKAVLGKDAPLDSWDLVMKPENLEKLKSCGVSFLDAPEEIFA 188

Query: 182 AVLNYLGMDPRSEKPGDY-AKAEARLLELRPYITYFHSSKYVSDLANGDVCIAFGYSGDV 240
            VLNYLG DP S K  DY   A   LL+LRP I YFHSS+Y++DLANGD+C+A G++GDV
Sbjct: 189 TVLNYLGKDPNSSKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDV 248

Query: 241 FQAANRAVEAKNGVKVAYSIPKEGSNLWFDLLAIPKDANNPEQALAFINYLLDPKVIAKV 300
           +QAANRA EAKNGV V+Y IPKEG+  +FD+ A+P DA N ++A  F+NYL+ P VIA +
Sbjct: 249 WQAANRAKEAKNGVNVSYFIPKEGALAFFDVFAMPADAKNKDEAYQFLNYLMRPDVIAHI 308

Query: 301 SATVGYANANPDAKAYMDASLVNNPEIYPPQEVLDKLYISSTPSPKIMRVMTRSWSKIKS 360
           S  V YAN N  +   +   + NNP IYPP +V  KL+      PKI RV TR+W+K+KS
Sbjct: 309 SDHVYYANGNKASLPLVSEEIRNNPAIYPPADVFAKLFTLKVQDPKIDRVRTRAWTKVKS 368

Query: 361 NR 362
            +
Sbjct: 369 GK 370