Pairwise Alignments

Query, 362 a.a., putrescine-binding periplasmic protein from Pseudomonas putida KT2440

Subject, 387 a.a., extracellular solute-binding protein (RefSeq) from Shewanella sp. ANA-3

 Score =  442 bits (1138), Expect = e-129
 Identities = 213/349 (61%), Positives = 268/349 (76%), Gaps = 1/349 (0%)

Query: 15  LFATTTQAAPTVSVYNWTDYIGDTTLADFQASSGIKVVYDVFDSNETLEGKLLAGRTGYD 74
           L +   QA   V VYNW+DYI + TL +F+  +GI+V+YDVFDSNE LE KLL+GR+GYD
Sbjct: 39  LASVAAQAEEVVRVYNWSDYIAEDTLENFKKETGIRVIYDVFDSNEVLEAKLLSGRSGYD 98

Query: 75  VVVPSNHFLARQAQAGAFLPLDRSKLPNWQHLDPKLLKQLEQNDPGNQYAVPYLWGTNGI 134
           +VVPSNHFLA+Q +AGAF PLDRSKL N+++L+  L+KQLE+ DPGNQYAVPYLWGTNGI
Sbjct: 99  IVVPSNHFLAKQIKAGAFKPLDRSKLSNFKNLNADLMKQLEKADPGNQYAVPYLWGTNGI 158

Query: 135 GYNVDKVKAALGVDH-IDSWAVLFEPENLKKLKQCGVAFMDSPDELFPAVLNYLGMDPRS 193
           GYN+DKVKAA+G D   DS  ++F P+  +K+ +CG A +DS D++ P  + YLG+DP S
Sbjct: 159 GYNIDKVKAAVGEDAPFDSMELIFNPKYAEKISKCGFAMLDSADDMVPQAMIYLGLDPNS 218

Query: 194 EKPGDYAKAEARLLELRPYITYFHSSKYVSDLANGDVCIAFGYSGDVFQAANRAVEAKNG 253
            K  DY KA   L ++RPY+TYFHSS+Y+SDLANGD+C+AFG+SGDVFQAA RA EA NG
Sbjct: 219 TKAEDYEKAGELLEKIRPYVTYFHSSRYISDLANGDICVAFGFSGDVFQAAARADEAGNG 278

Query: 254 VKVAYSIPKEGSNLWFDLLAIPKDANNPEQALAFINYLLDPKVIAKVSATVGYANANPDA 313
            K+ YSIPKEG+NLWFD+LAIP DA N E A   INYLL P+VIA +S  V YAN N  A
Sbjct: 279 NKIGYSIPKEGANLWFDMLAIPADAANVENAHKLINYLLRPEVIAPISNYVAYANPNDPA 338

Query: 314 KAYMDASLVNNPEIYPPQEVLDKLYISSTPSPKIMRVMTRSWSKIKSNR 362
           +  +D ++ N+P IYPP+EVLDKLYI      KI RV+TR W+K+KS +
Sbjct: 339 QPLVDEAIRNDPAIYPPKEVLDKLYIGEIRPLKIQRVLTRVWTKVKSGQ 387