Pairwise Alignments

Query, 618 a.a., conserved protein of unknown function from Pseudomonas putida KT2440

Subject, 1017 a.a., type VI secretion system tip protein VgrG from Vibrio cholerae E7946 ATCC 55056

 Score =  261 bits (666), Expect = 1e-73
 Identities = 177/605 (29%), Positives = 299/605 (49%), Gaps = 33/605 (5%)

Query: 27  NDEFLLEHFSGTEELSKL---------YEFDLALLSQQSDVKLKSLIGSQATVEIELSNG 77
           ++  ++  F G E LS           + + + L S  S++  +  +   A + I     
Sbjct: 15  DESLVVRGFEGQESLSDSVWRCEPCYGFRYQVDLASALSNLTAEQFVDQTAHLTILRDGQ 74

Query: 78  SFRHINGYVQRFSTQGSDGGYVRYAAVLGPWLWMLTCRFDTRIFQEKSVQAVVSEVFAGF 137
             + ING V++ S   +   +  Y+  L P L  L+ R ++RIFQ++SV  ++S +    
Sbjct: 75  VVQQINGIVRQLSKGDTGHRHTFYSLTLVPALERLSLRSNSRIFQQQSVPEIISILLQEM 134

Query: 138 GTLAKYEFRVSKPLKSHSYITQYRESDFNFVQRLLESEGLFYYFEHTADSHLMVITDDSS 197
           G +  Y F + +      +  QYRE+D  F+ R+   EGL Y   H A  H ++ TD S 
Sbjct: 135 G-IEDYAFALKRECAQREFCVQYRETDLQFLHRIAAEEGLVYSHLHEAQKHTLLFTDSSD 193

Query: 198 TLLPLPEQPQIRYHSASVTE-TADSITQWQSTRQLQSGQIAVRTFDYRQPRNFLPVTMQS 256
           +   L +   + Y++ +  E     +   Q     Q     ++ + +++P        Q 
Sbjct: 194 SQPKLAKP--VPYNALAGGEINLPYVVDLQFKTTAQVSHTELKDYSFKKPAYGFTQRTQG 251

Query: 257 LNQQGDVDRFEIYDFPGQYTHGSYEDGEAIVRNRIEALELMGKTFYGESNCRAMKPGYTF 316
            +       +E +D PG+Y   +  +G+A  + R+E L         +S+   +  G  F
Sbjct: 252 KDIAYQQPNYEHFDAPGRYKDDA--NGKAFSQIRLEYLRRDALLADAKSDEPLLLAGVRF 309

Query: 317 ELTQHYLHDTGAAENRKFLLLSVEHRGSNNYMTGDQAG-----YVNRFVCVRKKIAYRPQ 371
           +L  H  H    A NR +L++   H+G+      ++ G     Y N+   +   I +R +
Sbjct: 310 DLQDHLDH----AMNRDWLVVQANHQGTQPQALQEEGGSGATTYSNQLKLIPAHITWRAR 365

Query: 372 LNTRKPLINGPQTAIVVGPPGEEIFTDELGRVKLQFHWDRQGQFNDQSSCWVRVAQSGAS 431
               KP ++GP  A VVGP GEEI+ D  GRVK+ F WDR    N++SSCWVRVAQ  A 
Sbjct: 366 -PCAKPQVDGPMIATVVGPQGEEIYCDNFGRVKVHFPWDRYSSSNEKSSCWVRVAQEWAG 424

Query: 432 GGFGSIQIPRVGDEVVVVFLDGNPDRPLIMGSLYNSTNTPPWSLPANKTQSGFLTRSMKG 491
             +GS+ IPRVG EV+V FL+G+PD+P+I G  Y++TNT P++LP +KT++   T + +G
Sbjct: 425 SQYGSMAIPRVGHEVIVSFLNGDPDQPIITGRTYHATNTAPYALPDHKTKTVLRTETHQG 484

Query: 492 DGGTANFFRFEDKAGAEQIIMHAERNMDTEIELDETHDVGNNRSITVGGTHTETVKKDTV 551
            G   N   FED+AG+EQI++HA+++ D  IE D T  + +++ +TV       ++++  
Sbjct: 485 QG--YNELSFEDQAGSEQILLHAQKDWDALIEHDHTEVIRHDQHLTVDNDRFTRIQRNQH 542

Query: 552 VQVT-EGSYTLQVDNQFIQVAAKQHIILQVGDSSITLTPEGIEIK--GKVIVTTSTDTTQ 608
           + V  E    + +D+     A+ QH   +VG        + I +K   K++V    + T 
Sbjct: 543 LTVEGEVRSKIALDSSHEVGASLQH---KVGQRIAVEAGKEISLKSGAKIVVEAGAELTL 599

Query: 609 ITGAA 613
             G +
Sbjct: 600 KAGGS 604