Pairwise Alignments

Query, 618 a.a., conserved protein of unknown function from Pseudomonas putida KT2440

Subject, 694 a.a., type VI secretion system tip protein VgrG from Vibrio cholerae E7946 ATCC 55056

 Score =  288 bits (737), Expect = 5e-82
 Identities = 191/623 (30%), Positives = 318/623 (51%), Gaps = 46/623 (7%)

Query: 27  NDEFLLEHFSGTEELSKL---------YEFDLALLSQQSDVKLKSLIGSQATVEIELSNG 77
           ++  ++  F G E LS           + + + L S+ S++    ++  +A +++  ++ 
Sbjct: 15  DETLVVRGFHGQESLSNSVFLGQACYGFRYQMQLASRVSNLTADQMVDKRAELKLYRNSQ 74

Query: 78  SFRHINGYVQRFSTQGSDGGYVRYAAVLGPWLWMLTCRFDTRIFQEKSVQAVVSEVFAGF 137
             + ++G V+ FS       +  Y   L P L  L+ R ++RIFQ+++V  ++S +    
Sbjct: 75  LVQRVHGIVRAFSQGDIGHHHTFYQLTLVPALERLSLRHNSRIFQKQTVPEILSILLQEM 134

Query: 138 GTLAKYEFRVSKPLKSHSYITQYRESDFNFVQRLLESEGLFYYFEHTADSHLMVITDDSS 197
           G +  Y F + +      +  QYRESD +F+ RL   EGL Y F H A  H +  +D S 
Sbjct: 135 G-IHDYAFALKRDCVQREFCVQYRESDIDFLHRLAAEEGLVYSFVHEAGKHTLYFSDASD 193

Query: 198 TLLPLPEQPQIRYHS-ASVTETADSITQWQSTRQLQSGQIAVRTFDYRQPRNFLPVTMQS 256
           +L  LPE   I Y++ A  T     I       Q +  ++ ++ + +++P      T+Q 
Sbjct: 194 SLSKLPEP--IPYNALAGGTMDTPYIHGLTYRTQAEVSEVQLKDYSFKKPAYSFLQTVQG 251

Query: 257 LNQQGDVDRFEIYDFPGQYTHGSYEDGEAIVRNRIEALELMGKTFYGESNCRAMKPGYTF 316
                   R++ +D PG+Y      +G A  + R++ L     T  G+SN   ++ GY F
Sbjct: 252 TELDYQQTRYQHFDAPGRYKDDV--NGAAFSQIRLDYLRRHAHTATGQSNEPLLRAGYKF 309

Query: 317 ELTQHYLHDTGAAENRKFLLLSVEHRGSNNYMTGDQAG-----YVNRFVCVRKKIAYRPQ 371
           +L +H       A NR ++++S+ H+G       ++ G     Y N+F  +   + +R +
Sbjct: 310 DLQEHL----DPAMNRDWVVVSINHQGEQPQALQEEGGSGATTYNNQFSLIPGHLHWRAE 365

Query: 372 LNTRKPLINGPQTAIVVGPPGEEIFTDELGRVKLQFHWDRQGQFNDQSSCWVRVAQSGAS 431
               KP ++GP  A VVGP GEEIF DE GRVK+ F WDR    N+QSSCWVRV+Q  A 
Sbjct: 366 PQP-KPQVDGPMIATVVGPEGEEIFCDEHGRVKIHFPWDRYSNGNEQSSCWVRVSQGWAG 424

Query: 432 GGFGSIQIPRVGDEVVVVFLDGNPDRPLIMGSLYNSTNTPPWSLPANKTQSGFLTRSMKG 491
             +G I IPR+G EV+V FL+G+PD+P+I G  Y++TNTPP++LP +KT++   T + +G
Sbjct: 425 SQYGFIAIPRIGHEVIVSFLNGDPDQPIITGRTYHATNTPPYTLPEHKTKTVLRTETHQG 484

Query: 492 DGGTANFFRFEDKAGAEQIIMHAERNMDTEIELDET----HD------------VGNNRS 535
           +G   N   FED+AG EQI +HA+++ D  IE D T    HD            + +N+ 
Sbjct: 485 EG--FNELSFEDQAGKEQIYLHAQKDFDGLIENDHTTVIRHDQHLTVENDQFTQIKHNQH 542

Query: 536 ITVGGTHTETVKKDTVVQVTEGSYTLQVDNQFIQVAAKQHIILQVGDSSITLTPEGIEIK 595
           +TV G     VK D   ++  GS   ++ ++ I  A  + + L+ G+  +      + IK
Sbjct: 543 LTVEGESRTLVKLDCSSEI-GGSLQQKIGSKAIYDAGTE-VHLKAGNKLVLEAGNELTIK 600

Query: 596 -GKVIVTTSTDTTQITGAAVRIN 617
            G   +        + G+A+ +N
Sbjct: 601 AGGSFIKVDAGGVHVVGSAINLN 623