Pairwise Alignments

Query, 618 a.a., conserved protein of unknown function from Pseudomonas putida KT2440

Subject, 941 a.a., Rhs element Vgr protein from Dechlorosoma suillum PS

 Score =  286 bits (733), Expect = 2e-81
 Identities = 189/571 (33%), Positives = 289/571 (50%), Gaps = 71/571 (12%)

Query: 2   LTDVLSMLAP---QNRRLFKLNILTQTANDEFLLEHFSGTEELSKLYEFDLALLSQQSDV 58
           L+D+LS  A    Q  RL +L +L    ++E L     G E +S  Y  ++  LS  + +
Sbjct: 7   LSDLLSSYASAFVQESRLLELRVLG-VGSEELLPVEARGEESVSGDYRVEVGCLSPDTHL 65

Query: 59  KLKSLIGSQATVEIELSNGSFRHINGYVQRFSTQGSDGGYVRYAAVLGPWLWMLTCRFDT 118
           +LK LIG  A + + L++G  + I+G +     +G+DGG+ R+A V+ P L +LT R ++
Sbjct: 66  ELKQLIGRIAELNLLLADGGHKTISGLIAEARHEGADGGFSRFALVIVPGLSLLTHRTNS 125

Query: 119 RIFQEKSVQAVVSEVFA-------GFGTLAKYEFRVSKPLKSHSYITQYRESDFNFVQRL 171
           R+FQ+KSV  +V  + +        +    +++ R++K     SY  QYRESD +F++RL
Sbjct: 126 RVFQDKSVPEIVHTLLSEHRDAGGPWAAACRWQNRLAKDYPQRSYCLQYRESDRDFIRRL 185

Query: 172 LESEGLFYYFEHTADS------------HLMVITDDSSTLLPLPEQPQIRYHSASVTETA 219
           L  EG+   +E   +             H +V+ DD     P  +Q +IR+H A  +E A
Sbjct: 186 LAEEGIATRYEFQEEDSSGQRQDDATPLHTLVLFDDPYEPTP-AQQEKIRFHRADASEEA 244

Query: 220 DSITQWQSTRQLQSGQIAVRTFDYRQPRNF---LPVTMQSLNQQGDVD-RFEIYDFPGQY 275
           DS+T W + R+L+SG+  +  +DY+         P T     Q G V+ R E YD    Y
Sbjct: 245 DSLTAWDTARRLRSGKSQLLAWDYKPVTPLQADAPGTTDQGEQGGQVESRLEAYDPQAHY 304

Query: 276 THGSYEDGEAIVRNRIEALELMGKTFYGESNCRAMKPGYTFELTQHYLHDTGAAENRKFL 335
                +D     + R ++ +   K + G+S+ R +  G  F+L  H  H+    ++R+FL
Sbjct: 305 YGADNDDLSRYTQLRQDSRDRAAKDYQGQSSVRGLTAGQWFQLEDHPRHEGEDDDSRRFL 364

Query: 336 LLSVEHRGSNNY---------------------------MTGDQAGYVNRFVCVRKKIAY 368
           +  +     NN                             TGDQ  Y N F  VR+    
Sbjct: 365 VRHLNWHARNNLPGDLTDGLPGLLASAAGQHGTASDAAGATGDQP-YRNTFTAVRRDTPI 423

Query: 369 RPQLNT-RKPLINGPQTAIVVGPPGEEIFTDELGRVKLQFHWDRQ-------GQFNDQSS 420
            P     +KP   GPQTA VVGP GEEI TD+LGR+K+QFHW R+          +D+SS
Sbjct: 424 APDYAPYQKPTAKGPQTATVVGPQGEEIHTDDLGRIKIQFHWAREQDHPDGGAALDDRSS 483

Query: 421 CWVRVAQSGASGGFGSIQIPRVGDEVVVVFLDGNPDRPLIMGSLYNSTNTPP-----WSL 475
           CW+RVA       +G   +PR+G EV+V FL+G+ DRP++M  LYN ++ PP      SL
Sbjct: 484 CWIRVAVPWGGANWGHQYLPRIGQEVLVEFLEGDIDRPVVMAGLYNGSHRPPTYSGAGSL 543

Query: 476 PANKTQSGFLTRSMKGDGGTANFFRFEDKAG 506
           PAN+T +G  ++  KG+G   N   F+D  G
Sbjct: 544 PANRTLAGIKSKEYKGNG--YNELLFDDSTG 572