Pairwise Alignments

Query, 618 a.a., conserved protein of unknown function from Pseudomonas putida KT2440

Subject, 707 a.a., type VI secretion system Vgr family protein from Marinobacter adhaerens HP15

 Score =  270 bits (689), Expect = 2e-76
 Identities = 195/632 (30%), Positives = 302/632 (47%), Gaps = 60/632 (9%)

Query: 11  PQNRRLFKLNILTQTANDEFLLEHFSGTEELSKLYEFDLALLSQQSDVKLKSLIGSQATV 70
           PQ   L     + + ++D F +  F+ TE LS+L    L L S  S V   S++     +
Sbjct: 17  PQASGLQFTATIGEFSSDHFSVVGFALTERLSELLHGRLDLASTDSSVGASSVLEQPIDL 76

Query: 71  EIELSNGSFRHINGYVQRFSTQGSDGGYVRYAAVLGPWLWMLTCRFDTRIFQEKSVQAVV 130
            I       R   G V  F+   S     RY  V  P LW L    ++RIFQ +    +V
Sbjct: 77  VIWRDGTPLRCFTGVVSEFARGESGHRRTRYQLVFQPPLWRLALMHNSRIFQNRGTDEIV 136

Query: 131 SEVFAGFGTLAKYEFRVSKPLKSHSYITQYRESDFNFVQRLLESEGLFYYFEHTA----D 186
             +    G +    F + +  +   Y  Q+RESD  FV+RL   EG  Y ++H +    +
Sbjct: 137 RTLLEERG-IVDTVFDLERRPEEREYCVQHRESDLAFVERLAAEEGWHYRYQHGSLDGQE 195

Query: 187 SHLMVITD---DSSTLLPLPEQPQIRYHSASVTETADSITQWQSTRQLQSGQIAVRTFDY 243
              +V  D   DS  L  +P   +     A  +     + ++   ++++   +A++ + +
Sbjct: 196 PPALVFADHHRDSPRLEAVPYNGK-----AGGSTRTPCVFRFAYRKRVRPASVAMKDYTF 250

Query: 244 RQPRNFLPVTMQSLNQQGDVDRFEIYDFPGQYTHGSYEDGEAIVRNRIEALELMGKTFYG 303
           + P   L +  QS ++    + ++ YD+PG++   +   G      R+ AL     T +G
Sbjct: 251 KNPAYAL-MHEQSGDKLVHREDYQHYDYPGRFKQDA--SGRPFTEARLAALRSDASTAFG 307

Query: 304 ESNCRAMKPGYTFELTQHYLHDTGAAENRKFLLLSVEHRGSNNYMTGDQAG-----YVNR 358
           ESN     PG    LT H       A NR +LL ++ H GS      ++ G     Y N 
Sbjct: 308 ESNRPEFAPGARVPLTDH----DNEAMNRDWLLTAITHTGSQPQAVEEEGGSEPTRYGNH 363

Query: 359 FVCVRKKIAYRPQLNTRKPLINGPQTAIVVGPPGEEIFTDELGRVKLQFHWDRQGQFNDQ 418
           F  +    ++RP     KPL++GPQ A+V GP GEEI  D+ GRVK++F WDR    +  
Sbjct: 364 FTAIPADRSWRPVCE-HKPLMDGPQMAMVTGPEGEEIHCDQYGRVKVRFPWDRYALNDQH 422

Query: 419 SSCWVRVAQSGASGGFGSIQIPRVGDEVVVVFLDGNPDRPLIMGSLYNSTNTPPWSLPAN 478
           SS W+RV+Q  A G +G   +PR+G EV+V FLDG+PD+P+I G  +++TNTPP+SLP +
Sbjct: 423 SSAWLRVSQGWAGGQYGFTALPRIGHEVIVSFLDGDPDQPIITGRTWHATNTPPYSLPEH 482

Query: 479 KTQSGFLTRSMKGDGGTANFFRFEDKAGAEQIIMHAER-------NMDTEIELDETH-DV 530
           KT++   T++ KG+G  +N  RFED+AG EQI +HA++       N  TE+  ++ H  V
Sbjct: 483 KTRTTLKTKTHKGEG--SNELRFEDEAGGEQIYVHAQKDLALITENNRTEVIRNDCHLTV 540

Query: 531 GNNRS--------ITVGGTHTETVKKDTVVQVTEGSYTLQVDNQFIQ------------- 569
           GN+R          TV G   E   KD    VT G+  L+    ++              
Sbjct: 541 GNDRKAHIKGSGHATVNGEKREKNSKDRSFNVT-GTLHLKAGTAWLTDSGTELHIKAGQK 599

Query: 570 --VAAKQHIILQVGDSSITLTPEGIEIKGKVI 599
             + A   I L  G S + + P G+ + G  I
Sbjct: 600 AVIEAGAEITLNAGGSFVKIDPSGVAMAGATI 631