Pairwise Alignments

Query, 191 a.a., conserved protein of unknown function from Pseudomonas putida KT2440

Subject, 168 a.a., type VI secretion system contractile sheath small subunit from Vibrio cholerae E7946 ATCC 55056

 Score = 86.3 bits (212), Expect = 3e-22
 Identities = 54/159 (33%), Positives = 84/159 (52%), Gaps = 3/159 (1%)

Query: 30  RVHITYDVDIGDAIEKKELPFVVGVLGDFSGNPPEPLPKLKDRKFVYIDRDNFNGVLKGI 89
           R++I Y    GDA  + ELP    V+GDF G+  +    L++R  V +D++NF  V++  
Sbjct: 12  RINIKYIPATGDAQAEVELPLKTLVVGDFKGHAEQT--PLEERATVTVDKNNFEAVMRES 69

Query: 90  KPRLTYRVDNTLAKN-GTQLGVELNFNSLEDFEPQNVVKQVEPLRKLLEVRNKLADLRNK 148
           + ++T  V N L  +   +L VELNF SL DF P  V  QV  L+KL+E+R  L  L+  
Sbjct: 70  ELKITATVKNKLTDDENAELPVELNFKSLADFAPDAVASQVPELKKLIELREALVALKGP 129

Query: 149 MGGNDKLEELLMDVLQNTEKLKTLGKEFGREAEVKDPSS 187
           +G      E L  +L + E  + L  E    +  ++P +
Sbjct: 130 LGNIPAFRERLQSLLNSEESREKLLAELNLLSGQEEPQA 168