Pairwise Alignments

Query, 878 a.a., Protein ClpV1 from Pseudomonas putida KT2440

Subject, 870 a.a., Chaperone clpB (NCBI) from Rhodospirillum rubrum S1H

 Score =  548 bits (1411), Expect = e-160
 Identities = 356/878 (40%), Positives = 495/878 (56%), Gaps = 58/878 (6%)

Query: 22  KLNETSRTATESAAALCLSEHHYEVEVEHLLLQLLDNNDSDLAPILRHYQVVAERLQAQL 81
           KL + S+   ++A  + L E H +V  EHLL  LLD+ +   A ++R       R Q  +
Sbjct: 5   KLTDRSKGFLQAAQTIALRETHQQVTPEHLLKALLDDKEGLAANLIRAAGGDPLRAQEAV 64

Query: 82  VTALGTFKK-GNTRTPALSPHITRMIEQAWLLASIEYGVGQVRSAHLLQALLDDAELRRV 140
              +    K    +    +  + R+I+QA  +A  + G   V    LL AL   AE    
Sbjct: 65  NREVDKLPKVQGAQQMYWAQSLARVIDQATRMAE-KAGDSFVTVERLLIALAMAAETPAK 123

Query: 141 VIASAPELEKINADDLRLNLAALVEGSAESRQASPLASPAAPVSTSSKASGKTPALDQYT 200
            I     L +  A    LN A  VE   + R+A            S+ A  +  AL +Y 
Sbjct: 124 RI-----LAEAGATPQGLNKA--VEDLRKGRKAD-----------SAGAESQYDALKKYA 165

Query: 201 VNLTQSAREGRIDPVLGREFEVRQMVDILTRRRQNNPILTGEAGVGKTAVVEGLALRIAQ 260
            +LT++AREG++DPV+GR+ E+R+ + +L+RR +NNP+L GE GVGKTA++EGLALRI  
Sbjct: 166 RDLTEAAREGKLDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIIEGLALRIVN 225

Query: 261 GDVPAVLKDVALHTLDLGLLQAGAGVKGEFENRLKAVIEEVKRSLHPIILFIDEAHTLIG 320
           GDVP  L++  L  LDLG + AGA  +GEFE RLKA++ EV  +   IILFIDE HTLIG
Sbjct: 226 GDVPESLQNKKLMALDLGAMVAGAKFRGEFEERLKAMLTEVSAAEGEIILFIDEMHTLIG 285

Query: 321 SGGQAGQNDAANLLKPALARGELRTIAATTWAEYKKYFEKDAALARRFQVVKVEEPDEDK 380
           +G   G  DA+NLLKPALARG+L  + ATT  EY+K+ EKDAALARRFQ V V EP    
Sbjct: 286 AGAGEGAMDASNLLKPALARGDLHCVGATTLNEYRKHVEKDAALARRFQPVFVSEPGVAD 345

Query: 381 AIHMLRGLLGKMREHHKVAVMDEALVQAVRLSNRYITGRQLPDKAVSVLDTACARIALAQ 440
            I +LRG+  K   HH V + D ALV A  LSNRYIT R LPDKA+ ++D A +R+ +  
Sbjct: 346 TISILRGIKEKYELHHGVRIADNALVAAATLSNRYITDRFLPDKAIDLMDEAASRLRMEV 405

Query: 441 SSLPGALEDCRRQIDNLQAEIDVLGHEAGKGHDHARRLESLQAALQAEQQQEQQLNAQWQ 500
            S P AL++  R+I  L+ E + L  E  K      RL  L+  L   + Q   L   W+
Sbjct: 406 DSKPEALDELDRRIIQLKIEREALRKE--KDIASEARLSDLEKELADLESQSATLTEDWK 463

Query: 501 QELE-------LVEQLKALDAANDADAQQLNTLRA----------------------ELA 531
           +E E       + EQL+      D   +Q N  RA                       LA
Sbjct: 464 REKEGLAGSTRIKEQLEQARGDLDIAKRQANWARAGELEYGVIPDLERRLGEVESGDGLA 523

Query: 532 RVQGDQPLVHALVDSGAIAQVISGWTGIPLGKMLRDEIDTVQRLPALLGERVLGQDHALH 591
             QG + LV+ +V +  IA V+S WTGIP+ KML  E + +  +  +L  RV+GQ  A+ 
Sbjct: 524 HRQGGK-LVNEVVTAETIASVVSRWTGIPVDKMLAGEREKLLGMEKVLASRVVGQREAVV 582

Query: 592 EIGKRIKISRARMEDPNKPIGVFLLLGPSGVGKTETALALADTLYGGERNLITINMSEYQ 651
            +   ++ SRA ++DPN+P+G FL LGP+GVGKTE   ALA  L+  E+ ++ I+MSEY 
Sbjct: 583 AVSNAVRRSRAGLQDPNRPMGSFLFLGPTGVGKTELTKALAAFLFDDEQAMVRIDMSEYM 642

Query: 652 EAHTVSSLKGSPPGYVGYGEGGVLTEAVRRKPYSVVLLDEVEKAHPDVLELFFQVFDKGV 711
           E H VS L G+PPGYVGY EGG LTEAVRR+PY V+L DEVEKAHPDV  +  QV D G 
Sbjct: 643 EKHAVSRLIGAPPGYVGYDEGGALTEAVRRRPYQVILFDEVEKAHPDVFNVLLQVLDDGR 702

Query: 712 LDDGEGREINFRNTVIILTSNTGTERIMQTCLNATELPTPEAIVEDLRDQLNHVFKPAFL 771
           L DG+GR ++FRNT+I+LTSN G + +     N  E     A+   + + +   F+P FL
Sbjct: 703 LTDGQGRTVDFRNTLIVLTSNLGADIL----ANQPEGDDSGAVRGAVMEMVRAAFRPEFL 758

Query: 772 GRL-SIVPFYPVQDQILERIVALKLERIAKRFARNHQAELSYDQALVKAIAARCTEVDSG 830
            RL  I+ F+ +  + +  IV+++L R+A R  R+ +  L  D A    +A R  +   G
Sbjct: 759 NRLDEILLFHRLFRENMAGIVSIQLGRLADRL-RDRKMTLDLDDAARDWLAERGYDPVYG 817

Query: 831 ARNIDNILSQTLMPELAQRVLERMAQDAPIQHLAIELG 868
           AR +  ++ ++L   LA  VL+   +D  +  + +E G
Sbjct: 818 ARPLKRVIQRSLENPLATLVLDGRIKDGDVIRITVEGG 855