Pairwise Alignments

Query, 447 a.a., conserved protein of unknown function from Pseudomonas putida KT2440

Subject, 444 a.a., type VI secretion system baseplate subunit TssK from Vibrio cholerae E7946 ATCC 55056

 Score =  183 bits (465), Expect = 8e-51
 Identities = 133/457 (29%), Positives = 222/457 (48%), Gaps = 27/457 (5%)

Query: 1   MSKQSRVMWSEGMFLLPQHFQYQDEFHQHQLAEATLRSTPFHWGVQALQVDEDALANGSL 60
           M  ++RV+W+EG+F+ PQHFQ Q  + ++ L E     + + +G+  L ++ + L+ G +
Sbjct: 1   MFARNRVIWNEGLFIKPQHFQQQQRYTEYCLDERLSTVSRYLYGISELSLNPEYLSFGRI 60

Query: 61  QLKRLKLVFPDGSLYDAPQHDPLPAARDLKDLLKANDLKVYAALKLPEP--FGLNYVEDG 118
            ++R   V PDG+ +  PQ D LP A ++ D   AN + VY A+ L       +N+ E+ 
Sbjct: 61  AIERAVGVMPDGTTFRIPQEDHLPDALEVTDASLANQI-VYLAVPLRSESLMEINWPEER 119

Query: 119 HEHKAARRFRKQFDTLPDLNEGELENEITSLRLNVVLLVDGDSLDGYSHCPLAK-LTRNS 177
              +   R R +   +  +       +++ +RL   L+++ +    Y+   + + L +  
Sbjct: 120 GTGRYVSR-RLEVRDVHSVQGDTTTIDVSPVRLQ--LMLEREDRSAYASIAIGRILEKRP 176

Query: 178 MGGFNLDPHFVHPTLHLGSHETIAGIGKRLLGALQAKSKALSGRRRERADQI-------A 230
            G   LDP F+        H  + GI      AL      +SG  RERA  I       A
Sbjct: 177 DGSVVLDPDFI------PCHLNVVGI-----SALHRFINEMSGLMRERAKNIAQRISSPA 225

Query: 231 EFGSSDVTLFWLLNTVNRAHPQLAHLLAHPRLHPERLYLFLADLAGGLLTFTLDTQL-SD 289
           + G +DV+ F LL  +NR  PQ+ HL     LHPERL+  L+ + G L TFT +++L   
Sbjct: 226 QGGVADVSDFMLLQALNRLQPQMKHLAELRSLHPERLFECLSCVCGELATFTDESRLPPS 285

Query: 290 IPEYDHHDPAASLVKLDEMIRVMLDNVVPNQCIVINLTQTKPSHWQGQLHDPRLAE-ADF 348
           +P Y+H  P+ S   L   +R  L  V+  + + I L + K       +HDP+L E A+F
Sbjct: 286 LPSYNHDSPSHSFQPLIRSLRQSLSVVLEPRAVSIQLDKRKYGLMVAPIHDPQLMESAEF 345

Query: 349 YIAVHADMPGASLLELVPRAFKVGSPEDIEVVVNSAMPGVTLNHAARLPNAIPVRLDNQY 408
            IAV A MP   L  L  +  KV S E I  +++  +PG+ L      P  +P      Y
Sbjct: 346 IIAVKARMPLDELRRLFTQQTKVASVEKIRELISLQLPGIPLTPLPVAPRQLPYHAGYTY 405

Query: 409 FAIEPHGTVYERMISAQAICFYAPSAFTNLKLELMAV 445
           + ++     +  +  +    F+  +AF +L+L+  A+
Sbjct: 406 YQLDKTSAAWAMLTHSSGFAFHVAAAFDDLELQFWAI 442