Pairwise Alignments

Query, 447 a.a., conserved protein of unknown function from Pseudomonas putida KT2440

Subject, 448 a.a., type VI secretion protein from Herbaspirillum seropedicae SmR1

 Score =  359 bits (922), Expect = e-104
 Identities = 184/447 (41%), Positives = 278/447 (62%), Gaps = 3/447 (0%)

Query: 1   MSKQSRVMWSEGMFLLPQHFQYQDEFHQHQLAEATLRSTPFHWGVQALQVDEDALANGSL 60
           +++ ++V+W EG+FL PQHFQ QD +H+ +L +  L   PF WG+ +L+VD D+L N +L
Sbjct: 1   VNQSNKVLWGEGLFLRPQHFQRQDHYHEARLHQTALTLNPFCWGISSLKVDHDSLNNNTL 60

Query: 61  QLKRLKLVFPDGSLYDAPQHDPLPAARDLKDL-LKANDLKVYAALKLPEPFGLNYVEDGH 119
           ++  L  +F DG +Y AP  D LP   +L ++ L    +  YAAL + + FG N+     
Sbjct: 61  RILELSAIFQDGEIYKAPDGDDLPDPIELTEIPLSQQSVTFYAALPVLKSFGSNFASGVA 120

Query: 120 EHKAARRFRKQFDTLPDLNEGELENEITSLRLNVVLLVDGDSLDGYSHCPLAKLTRNSMG 179
            H+++R  +   +T PDL     + E++ L+  V L  + +  D     P+ +L R+S  
Sbjct: 121 NHQSSRYIQHNIET-PDLFTDAAKAELSYLKKAVRLASESEPRDSLVCIPIVRLRRSSSS 179

Query: 180 GFNLDPHFVHPTLHLGSHETIAGIGKRLLGALQAKSKALSGRRRERADQIAEFGSSDVTL 239
           GF LDP FV P+L + +   +    +RL+ ALQAK  AL G  RE +  + EF S D+T 
Sbjct: 180 GFELDPDFVAPSLSVHAAPLLFQRLRRLMDALQAKVSALYGHHREPSKNVVEFRSGDITS 239

Query: 240 FWLLNTVNRAHPQLAHLLAHPRLHPERLYLFLADLAGGLLTFTLDTQLSDIPEYDHHDPA 299
           FWLL+T + A+ +L+H L +P LHPERLY  L  LAG L+TF+    L+D+P Y+H DP 
Sbjct: 240 FWLLHTASTAYARLSHYLNNPLLHPERLYEQLLALAGSLMTFSRSLMLADLPPYEHRDPG 299

Query: 300 ASLVKLDEMIRVMLDNVVPNQCIVINLTQTKPSHWQGQLHDPRLAE-ADFYIAVHADMPG 358
               +LD +IR +LD V+ ++   I L ++KPS+  G L   ++ E  +FY+AV+AD+P 
Sbjct: 300 PPFARLDGIIRELLDTVISSRYFAIVLHESKPSYHMGMLDSGKINEKTNFYLAVNADLPA 359

Query: 359 ASLLELVPRAFKVGSPEDIEVVVNSAMPGVTLNHAARLPNAIPVRLDNQYFAIEPHGTVY 418
             L+++VP  FKVG+P+D+E  V +A+PGV L H+ ++P A+PVR D  YF +E  G +Y
Sbjct: 360 IELVDVVPLRFKVGAPDDVEKFVLAALPGVKLVHSPQVPAALPVRPDTYYFTLESKGPMY 419

Query: 419 ERMISAQAICFYAPSAFTNLKLELMAV 445
           ERM+ AQ++C Y PS    LKLEL+AV
Sbjct: 420 ERMLQAQSLCIYVPSGIRELKLELLAV 446