Pairwise Alignments

Query, 168 a.a., putative RNA polymerase sigma-70 factor from Pseudomonas putida KT2440

Subject, 169 a.a., RNA polymerase sigma factor from Xanthomonas campestris pv. campestris strain 8004

 Score =  138 bits (348), Expect = 4e-38
 Identities = 73/159 (45%), Positives = 102/159 (64%), Gaps = 1/159 (0%)

Query: 7   SLNLQVQTLYTEHHGWLQGWLGRKLGNACDAADLAHDTFVRLLSRQGNPYFGNEPRALLT 66
           +L  QV+ LYT+HHGWLQGWL RKLG+ C AADLA DTF+ ++          EPR  L 
Sbjct: 7   ALQQQVERLYTDHHGWLQGWLRRKLGDGCVAADLAQDTFISVIDAGAADQI-REPRPFLA 65

Query: 67  HIAKGLVVDRWRRQDVERAYLEAIAHLPQPEVPSPETRWLILETLYRIDAMLRDMPARVR 126
            IA+ L+  R RR+ +E +YLE +A LP+   PSPE   L LE + ++D  L  +P +V+
Sbjct: 66  TIARRLMAHRQRRKLLEASYLEMLATLPEELAPSPELHLLALEAVQQLDQALDGLPPKVK 125

Query: 127 QVFLLSQLDGLTYAQIAEQLQVSLITIKRDMRTAFLACL 165
           + FLL+ L  L+YAQIA++L VS  ++K+ +  A   CL
Sbjct: 126 EAFLLAHLHELSYAQIAQRLGVSSSSVKQYLTRANRQCL 164