Pairwise Alignments

Query, 168 a.a., putative RNA polymerase sigma-70 factor from Pseudomonas putida KT2440

Subject, 171 a.a., RNA polymerase sigma factor, sigma-70 family from Dechlorosoma suillum PS

 Score =  102 bits (253), Expect = 4e-27
 Identities = 65/158 (41%), Positives = 91/158 (57%), Gaps = 9/158 (5%)

Query: 12  VQTLYTEHHGWLQGWLGRKLGNACDAADLAHDTFVRLLSRQGNPYFGNEPRALLTHIAKG 71
           V  LY  HHGWL GWL +K G    AADL  DTF++LL+    P    EPRA L   A  
Sbjct: 10  VDHLYRSHHGWLFGWLRKKTGCRDHAADLTQDTFLKLLALPEMPAL-REPRAYLLVTANR 68

Query: 72  LVVDRWRRQDVERAYLEAIAHLPQPE-VPSPE----TRWLILETLYRIDAMLRDMPARVR 126
           L+++  +R  VER  L+A+  L +P+  PSPE     R L+ + L  +   L + P   R
Sbjct: 69  LLINLHQRSRVERETLQALVLLLEPDSEPSPEHIVAMRQLLRQVLLMLSEELEEKP---R 125

Query: 127 QVFLLSQLDGLTYAQIAEQLQVSLITIKRDMRTAFLAC 164
           + FLL++L+GL+YA IA +LQVS  ++K+ +  A   C
Sbjct: 126 RAFLLARLEGLSYADIAAELQVSESSVKQYLAKALAHC 163