Pairwise Alignments

Query, 291 a.a., putative Membrane protein from Pseudomonas putida KT2440

Subject, 330 a.a., AEC family transporter from Vibrio cholerae E7946 ATCC 55056

 Score = 73.6 bits (179), Expect = 6e-18
 Identities = 74/296 (25%), Positives = 126/296 (42%), Gaps = 32/296 (10%)

Query: 8   VLAPVFIVAGIGFAWARKGL--DYPTDFIARVVMTVGTPSLVLSTLSRTELDPNAFTSVA 65
           +  P+ ++ G+G  + R  L  +   +  +R+V  V  P+++  ++  ++ D ++ TS+ 
Sbjct: 26  ITGPICLMLGLGVLFKRINLINENFIEVASRIVFQVTLPAMLFLSIVSSKHDFSSSTSLV 85

Query: 66  VACLLCTLGMALAALLVCRA---SGMHWRVLLPAFMFPNTGNMGLPISLYAFGEHGLALA 122
           V  L+  +   L  L   R        W V+       NT  +GL      +G  G+ALA
Sbjct: 86  VYSLIANMLFFLFTLFSTRKLIDRPHDWGVITQGGFRANTAIIGLAYVANTYGNAGVALA 145

Query: 123 VAFFLTLSIVQFTIGMAISGTAAS-----------LKALLRNPIVISLAGAMPIIFLDFE 171
            A ++  + V F I   I+ T               K L +NP++IS+            
Sbjct: 146 -AIYVASTTVLFNIQAVIALTPRGESNGWQAGKLMFKTLTKNPLIISIVLGFLCYLASVP 204

Query: 172 LPRWLANTADLLGGMTIPLMLLTLGVSLASIRL---RH-----VGSGMLLGGLRIGLGAA 223
           +P+ + +       MT+PL LL  G SL    L   RH      G  ++L  L I  GA 
Sbjct: 205 IPKIVTDAGHYFANMTLPLALLCTGGSLNLNSLKDDRHSAWFATGYKLILSPLLITGGA- 263

Query: 224 VGWAVGAVLGMDSLERAVLMVQSAMPVAVFNYLMAVRANREPEQVANLVMCSTVLS 279
             W    +LG   L+  +L + ++ P A  +Y+MA          AN++  +TV S
Sbjct: 264 --W----LLGFRGLDLGLLFLMTSAPTAAASYVMARAMGGNATLAANIIALTTVFS 313