Pairwise Alignments

Query, 291 a.a., putative Membrane protein from Pseudomonas putida KT2440

Subject, 318 a.a., hypothetical protein (RefSeq) from Shewanella sp. ANA-3

 Score = 72.4 bits (176), Expect = 1e-17
 Identities = 69/296 (23%), Positives = 128/296 (43%), Gaps = 30/296 (10%)

Query: 7   AVLAPVFIVAGIGFAWARKGL--DYPTDFIARVVMTVGTPSLVLSTLSRTELDPNAFTSV 64
           ++  P+ ++  +G    R  +  ++  D  +++V  V  P+L+  ++  +  D  A   +
Sbjct: 13  SITGPICLMLALGVMLKRTQVIDEHFIDVASKLVFNVTLPALLFLSIISSHHDLAASAPL 72

Query: 65  AVACLLCTLGMALAALLVCRA---SGMHWRVLLPAFMFPNTGNMGLPISLYAFGEHGLAL 121
               LL  L   + +    +          V++      NT  +GL     A+GE G+AL
Sbjct: 73  IGYGLLANLLFFILSTYATKRFFPEPKDQGVIIQGGFRANTAIIGLAYVSNAYGESGVAL 132

Query: 122 AVAFFLTLSI---VQFTIGMAISGTAAS-------LKALLRNPIVISLAGAMPIIFLDFE 171
           A  +  ++++   +Q  I ++  G  +S       +K + +NP++I++   M    L   
Sbjct: 133 AAVYVASMTLLYNIQAVICLSPRGEESSRRAFAVIIKTITKNPLIIAIMLGMLFYLLAIP 192

Query: 172 LPRWLANTADLLGGMTIPLMLLTLGVSLASIRLRH--------VGSGMLLGGLRIGLGAA 223
           +P+ + +       MT+PL LL  G SL    LRH            ++   L I LGA 
Sbjct: 193 VPKMVLDAGQYFANMTLPLALLCTGGSLDIGSLRHEKYSTWFSTALKLVFAPLFITLGA- 251

Query: 224 VGWAVGAVLGMDSLERAVLMVQSAMPVAVFNYLMAVRANREPEQVANLVMCSTVLS 279
                  +LG   +E A++ + SA P A  +Y+MA          AN++  +TV S
Sbjct: 252 ------LILGYRGVELALVFLMSAAPTAAASYVMARAMGGNATLAANIIALTTVCS 301