Pairwise Alignments

Query, 352 a.a., putative ABC transporter permease protein from Pseudomonas putida KT2440

Subject, 357 a.a., ABC-type uncharacterized transport system, permease component from Pseudomonas stutzeri RCH2

 Score =  504 bits (1298), Expect = e-147
 Identities = 246/355 (69%), Positives = 296/355 (83%), Gaps = 5/355 (1%)

Query: 1   MTAYILRRLLLIIPTLLAILLVNFAIVQAAPGGPVEQAVARLQGLGGG----APGARAEV 56
           M AYI RRLLLIIPTL  ILL+NF I+QAAPGGPVEQA+A+L+G  G     A G     
Sbjct: 1   MLAYIFRRLLLIIPTLFGILLINFIIIQAAPGGPVEQAIAKLEGFEGATSRIAGGGSEVA 60

Query: 57  VHGES-RATRGLDPKLIEEIKRQYGFDKSAPERLWLMLGQYARLDFGNSFFRGAKVTDLI 115
           V G S R  +GLDP+L+ EI+R YGFDK   ER W+ML  Y RLDFG SFFR AKVTDLI
Sbjct: 61  VAGTSYRGAQGLDPELVAEIERLYGFDKPPVERFWIMLSNYLRLDFGESFFRDAKVTDLI 120

Query: 116 LDKLPVTLSLGFWATLITYLVSIPLGIRKAMRHGSRFDAWSSALIVIGYALPSFLFALLL 175
           ++K+PV++SLG W+TLI YL SIPLGI KA RHGS+FD W+S+ I++GYA+P+FLFA+LL
Sbjct: 121 IEKMPVSISLGLWSTLIMYLASIPLGIAKATRHGSKFDVWTSSAIIVGYAIPAFLFAILL 180

Query: 176 IVLFAGGTSLNWFPVRGLVSDNFDELSLLGKVADYFWHLVLPVAALVIGGFATLTLLTKN 235
           IVLFAGG+  NWFP+RGL S NFD+LSL GK+ DYFWHL LPV ALVIG FATLTLLTKN
Sbjct: 181 IVLFAGGSYWNWFPLRGLTSANFDDLSLGGKIIDYFWHLALPVTALVIGNFATLTLLTKN 240

Query: 236 AFLDEVSRQYVVTARAKGLSERRVLYGHVLRNAMLLVVAGLPQALITVFFAGSLLIEVIF 295
           +FLDE+++QYV+TARAKGLS+ RVLYGHV RNAML+++AG P A I +FF GSLLIEVIF
Sbjct: 241 SFLDEINKQYVITARAKGLSKNRVLYGHVFRNAMLIIIAGFPAAFIGMFFTGSLLIEVIF 300

Query: 296 SLDGLGRMSYEAAVSRDYPVVFGTLFIFTLAGLLIRLIGDLSYTLLDPRIDFDTR 350
           SLDGLG +S+EAA++RDYPVVFGTLF+FTL GL+++LIGDL+YTL+DPRIDF++R
Sbjct: 301 SLDGLGLLSFEAAINRDYPVVFGTLFLFTLLGLVVKLIGDLTYTLVDPRIDFESR 355