Pairwise Alignments

Query, 352 a.a., putative ABC transporter permease protein from Pseudomonas putida KT2440

Subject, 360 a.a., peptide ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

 Score =  444 bits (1141), Expect = e-129
 Identities = 211/360 (58%), Positives = 277/360 (76%), Gaps = 10/360 (2%)

Query: 1   MTAYILRRLLLIIPTLLAILLVNFAIVQAAPGGPVEQAVARLQGL----------GGGAP 50
           M +YILRRLLL++PTL AI+ +NF I+Q APGGPVEQA+A+L+G           GG   
Sbjct: 1   MLSYILRRLLLVVPTLWAIITINFFIIQIAPGGPVEQAIAQLEGNTSGVMERFTGGGQEV 60

Query: 51  GARAEVVHGESRATRGLDPKLIEEIKRQYGFDKSAPERLWLMLGQYARLDFGNSFFRGAK 110
            A  +      + +RGLDP+++EEI R++GFDK   ER + ML  YA  +FG S FRG  
Sbjct: 61  AAPTDAPVSGYKGSRGLDPQVVEEITRRFGFDKPIHERYFQMLKDYATFNFGESLFRGGD 120

Query: 111 VTDLILDKLPVTLSLGFWATLITYLVSIPLGIRKAMRHGSRFDAWSSALIVIGYALPSFL 170
           V DLI+++LPV++SLG W+TL+ YL+SIPLGI KA+ HGSRFD WSSA+++IGYA+P FL
Sbjct: 121 VIDLIVERLPVSISLGLWSTLLIYLISIPLGISKAIHHGSRFDVWSSAVVIIGYAIPGFL 180

Query: 171 FALLLIVLFAGGTSLNWFPVRGLVSDNFDELSLLGKVADYFWHLVLPVAALVIGGFATLT 230
           FA++LI+LFA G   +WFP+RGLVSDNF  L    +V DYFWHL LP  A+VIGGFATL+
Sbjct: 181 FAIILIILFASGNYFSWFPLRGLVSDNFASLPWYQQVLDYFWHLTLPTLAMVIGGFATLS 240

Query: 231 LLTKNAFLDEVSRQYVVTARAKGLSERRVLYGHVLRNAMLLVVAGLPQALITVFFAGSLL 290
           +LTKN+FLDE+++QYVVTARAKGL ERR+LY HV RNAML+++AG P A I++FF GS+L
Sbjct: 241 MLTKNSFLDEINKQYVVTARAKGLDERRILYKHVFRNAMLIIIAGFPSAFISIFFTGSML 300

Query: 291 IEVIFSLDGLGRMSYEAAVSRDYPVVFGTLFIFTLAGLLIRLIGDLSYTLLDPRIDFDTR 350
           IEV+FSL+G+G + +EA + RDYP+VF +L+I TL GLL+ +I DL+Y  +DPRIDF+ R
Sbjct: 301 IEVMFSLEGIGLLGFEATIQRDYPLVFSSLYIMTLLGLLLSIISDLTYMWVDPRIDFEAR 360