Pairwise Alignments

Query, 352 a.a., putative ABC transporter permease protein from Pseudomonas putida KT2440

Subject, 306 a.a., oligopeptide ABC transporter permease OppB from Vibrio cholerae E7946 ATCC 55056

 Score =  148 bits (374), Expect = 2e-40
 Identities = 97/348 (27%), Positives = 171/348 (49%), Gaps = 43/348 (12%)

Query: 1   MTAYILRRLLLIIPTLLAILLVNFAIVQAAPGGPVEQAVARLQGLGGGAPGARAEVVHGE 60
           M  +I +R+   IPT+L ++ ++F +++ APG P                          
Sbjct: 1   MLKFIAKRIFEAIPTMLVLITISFFLMRYAPGNPFS------------------------ 36

Query: 61  SRATRGLDPKLIEEIKRQYGFDKSAPERLWLMLGQYARLDFGNSF-FRGAKVTDLILDKL 119
             + R L P+++  I  +YG DK   E+    L    + DFG SF ++   V +LI   L
Sbjct: 37  --SERPLPPEVMANINAKYGLDKPVSEQYLTYLTNIVQGDFGPSFKYKDYTVNELIASAL 94

Query: 120 PVTLSLGFWATLITYLVSIPLGIRKAMRHGSRFDAWSSALIVIGYALPSFLFALLLIVLF 179
           PV++ +G  A + T ++ + +G   A++  +  D    +  ++G  +PSF+ A +LI +F
Sbjct: 95  PVSVKIGLAAFVFTVIMGVTVGTIAALKQNTWIDYTIMSTAMLGVVMPSFVLAPVLIYIF 154

Query: 180 AGGTSLNWFPVRGLVSDNFDELSLLGKVADYFWHLVLPVAALVIGGFATLTLLTKNAFLD 239
           A   SL  FP  G     F+             ++ LPV  + +   AT   +T+ + ++
Sbjct: 155 AIQFSL--FPAGGWQDGGFE-------------YMALPVLGMSLLYVATFARITRGSMIE 199

Query: 240 EVSRQYVVTARAKGLSERRVLYGHVLRNAMLLVVAGLPQALITVFFAGSLLIEVIFSLDG 299
            ++  ++ TARAKGLS   ++  H L+ A+L VV+ +  A + +   GS++IE IF L G
Sbjct: 200 TLNSNFIRTARAKGLSYGYIVVKHALKPALLPVVSYMGPAFVGII-TGSVVIETIFGLPG 258

Query: 300 LGRMSYEAAVSRDYPVVFGTLFIFTLAGLLIRLIGDLSYTLLDPRIDF 347
           +G++   AA +RDY +V G   +     +L   I D+    +DP+I +
Sbjct: 259 IGKLFVNAAFNRDYSLVMGVTILIGFLFILFNAIVDILLAYIDPKIRY 306