Pairwise Alignments

Query, 352 a.a., putative ABC transporter permease protein from Pseudomonas putida KT2440

Subject, 373 a.a., ABC transporter, permease protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  385 bits (990), Expect = e-112
 Identities = 197/359 (54%), Positives = 253/359 (70%), Gaps = 11/359 (3%)

Query: 4   YILRRLLLIIPTLLAILLVNFAIVQAAPGGPVEQAVARLQGLG-----------GGAPGA 52
           Y+LRRLLL++PTLL I+ +NF +VQ APGGPVEQ +ARL+G G           GG    
Sbjct: 14  YMLRRLLLVLPTLLGIVTINFFVVQLAPGGPVEQYIARLEGDGAAYMERIGAGDGGDMQP 73

Query: 53  RAEVVHGESRATRGLDPKLIEEIKRQYGFDKSAPERLWLMLGQYARLDFGNSFFRGAKVT 112
            A+      +   GL P+ +E I+RQYGFD+   ER   MLG +A   FG+S F+G  V 
Sbjct: 74  AADDGTAAYKGAAGLSPQAVEAIRRQYGFDRPILERYVTMLGDFALFRFGDSLFKGRSVI 133

Query: 113 DLILDKLPVTLSLGFWATLITYLVSIPLGIRKAMRHGSRFDAWSSALIVIGYALPSFLFA 172
           DL+ D +PV+LSLG W+TL+ Y VSIPLG+ +A+R GSRFD  S   ++  +A+P+FL A
Sbjct: 134 DLVGDAMPVSLSLGLWSTLVIYAVSIPLGMARALRRGSRFDTMSGIAVIAAHAIPAFLLA 193

Query: 173 LLLIVLFAGGTSLNWFPVRGLVSDNFDELSLLGKVADYFWHLVLPVAALVIGGFATLTLL 232
           +LLIVLFAGG+ L WFP+RGLVS   D L    +V DY  H+VLPV A+V+GGFA LT L
Sbjct: 194 VLLIVLFAGGSYLQWFPLRGLVSPGHDALPFGARVLDYAHHMVLPVTAMVVGGFAGLTSL 253

Query: 233 TKNAFLDEVSRQYVVTARAKGLSERRVLYGHVLRNAMLLVVAGLPQALITVFFAGSLLIE 292
           T+NAFLDE+ + YV TA AKGL+ + VL+ HV RNAMLLV++GLP A + VFF GSLLIE
Sbjct: 254 TRNAFLDELGKAYVETALAKGLTRKAVLWRHVFRNAMLLVISGLPGAFVRVFFTGSLLIE 313

Query: 293 VIFSLDGLGRMSYEAAVSRDYPVVFGTLFIFTLAGLLIRLIGDLSYTLLDPRIDFDTRA 351
            IFSL+GLG M +EAA+ RDYPV+F +L++FTL GL   L GD+    +DPRIDF+ RA
Sbjct: 314 TIFSLNGLGLMGFEAAMQRDYPVMFASLYVFTLIGLTASLAGDMLCMAVDPRIDFERRA 372