Pairwise Alignments

Query, 338 a.a., putative ABC transporter permease protein from Pseudomonas putida KT2440

Subject, 339 a.a., Oligopeptide transport system permease protein OppC (TC 3.A.1.5.1) from Pseudomonas fluorescens FW300-N2E2

 Score =  482 bits (1241), Expect = e-141
 Identities = 229/337 (67%), Positives = 283/337 (83%)

Query: 2   LSPLSRRRLQRFRRHRLGWVSLWLFAGLLLLSLCAELVANDKPLLLGYKGNVYVPALKRY 61
           LSPL+RRR + F+ ++ GW SLWLF  L  LSL AEL+ANDKPL++ Y    Y PALKRY
Sbjct: 3   LSPLNRRRFELFKANKRGWWSLWLFLILFGLSLGAELIANDKPLVVHYDDGWYFPALKRY 62

Query: 62  TEQQFGGQLPFQPDYRSAYVRQLIAEQGGWMLFAPIPFSADTPNYDLQVPTPSPPSASNW 121
            E  FGG+ P + +Y+S Y+R+L+A +  W+L+APIPFS  + NYDL+VP P+PPS+ NW
Sbjct: 63  PETTFGGEFPLEANYKSPYIRELLAAKNAWVLWAPIPFSYQSINYDLKVPAPAPPSSVNW 122

Query: 122 LGTDDQGRDVLARVLYGTRVSLLFAFALTVVSVLIGVAAGALQGYHGGWVDLFGQRLLEV 181
           LGTDDQGRDVLARV+YG R+S+LFA  LTV+S +IGV AGALQG++GGWVDL GQR LE+
Sbjct: 123 LGTDDQGRDVLARVIYGFRISVLFALTLTVLSSIIGVIAGALQGFYGGWVDLAGQRFLEI 182

Query: 182 WSGLPVLYLLIILSGFVEPDFWWLLGIMALFSWLTLVDVVRAEFLRGRNLEYVKAARALG 241
           WSGLPVLYLLIIL+ FV+P+FWWLLGIM LFSW++LVDVVRAEFLRGRNLEYV+AARALG
Sbjct: 183 WSGLPVLYLLIILASFVQPNFWWLLGIMLLFSWMSLVDVVRAEFLRGRNLEYVRAARALG 242

Query: 242 LPDSQVMLRHILPNAMNATLTYVPFMLTGAITTLTALDFLGFGMPAGSASLGELVTQGKQ 301
           + +  +M RHILPNAM +T+T++PF+LTGAI TLTALDFLGFG+P G+ SLGELV QGK 
Sbjct: 243 MQNGAIMFRHILPNAMVSTMTFMPFILTGAIGTLTALDFLGFGLPPGAPSLGELVAQGKS 302

Query: 302 HLEAPWLGFTAFFALAVILSLLVFIGDALREAFDPRR 338
           +L+APWLG +AF  LAV+LSLLVFIG++ R+AFDPR+
Sbjct: 303 NLQAPWLGISAFAVLAVMLSLLVFIGESARDAFDPRK 339