Pairwise Alignments

Query, 338 a.a., putative ABC transporter permease protein from Pseudomonas putida KT2440

Subject, 300 a.a., oligopeptide ABC transporter permease OppC from Vibrio cholerae E7946 ATCC 55056

 Score =  135 bits (339), Expect = 2e-36
 Identities = 77/224 (34%), Positives = 120/224 (53%), Gaps = 3/224 (1%)

Query: 116 PSASNWLGTDDQGRDVLARVLYGTRVSLLFAFALTVVSVLIGVAAGALQGYHGGWVDLFG 175
           PSA +W GTD  GRD+  R L G R+SL+      +V+VLIG   GA  G+ GG  D   
Sbjct: 76  PSAEHWFGTDALGRDLFVRTLVGGRISLMVGIMGALVAVLIGTLYGAASGFIGGRTDRVM 135

Query: 176 QRLLEVWSGLPVLYLLIILSGFVEPDFWWLLGIMALFSWLTLVDVVRAEFLRGRNLEYVK 235
            R+LE+   +P ++L+I+L  F   +   +   +   +WL +  +VR + L  R+ E+++
Sbjct: 136 MRILEILYAIPFMFLVIVLVTFFGRNIVLIFVAIGAIAWLDMARIVRGQTLSLRSKEFIE 195

Query: 236 AARALGLPDSQVMLRHILPNAMNATLTYVPFMLTGAITTLTALDFLGFGMPAGSASLGEL 295
           AA   G+    ++ RHI+PN +     Y   ++   I T + L FLG G+     S G L
Sbjct: 196 AAHVCGVSKWNIITRHIVPNVLGIVAVYSTLLIPSMILTESFLSFLGLGVQEPMTSWGAL 255

Query: 296 VTQGKQHLE-APW-LGFTAFFALAVILSLLVFIGDALREAFDPR 337
           + +G   +E A W L F A F + + L    ++GD LR+A DP+
Sbjct: 256 LQEGANTMEVAIWQLLFPAAF-MVLTLFCFNYVGDGLRDALDPK 298