Pairwise Alignments

Query, 481 a.a., putative transcriptional regulator from Pseudomonas putida KT2440

Subject, 472 a.a., sigma-54 dependent transcriptional regulator/response regulator (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  243 bits (621), Expect = 8e-69
 Identities = 146/348 (41%), Positives = 201/348 (57%), Gaps = 25/348 (7%)

Query: 158 QELASTRSQLRARQAKYSFA-QFVGSSAPSLEAKRRARRGAGSDSPVLLLGETGTGKELL 216
           +EL      LR+     S A + +G SAP    + +  R A +D+ VL+ GE GTGKEL 
Sbjct: 121 RELRRENQALRSSLGAGSKADELIGESAPMRRIREQIARVAPTDAWVLITGENGTGKELA 180

Query: 217 AHAIHAASARAHRAFVSINSAAIPETLLEAEFFGTAPGAFTGADRKGRSGKLQLAEGGTL 276
           A A+HA S RA R  V++N AAIPE L+E+E FG   GAFTGA+   R+GK ++A  GTL
Sbjct: 181 ARAVHAGSQRATRPLVAVNCAAIPEELIESELFGHEKGAFTGAE-SARTGKFEMAHRGTL 239

Query: 277 FLDEIGDMPLALQSKLLRVLQEKEYEPVGSNQMLRSDVRIIAATSIDLQAAMARGAFRAD 336
           FLDEIGDM L  Q+K+LR+LQE+ +E VG  + +R DVR++AAT+ +L+  +A+G FR D
Sbjct: 240 FLDEIGDMSLKTQAKILRILQEQSFEKVGGTRTIRVDVRVVAATNKNLEEQIAQGTFRED 299

Query: 337 LYYRLNVLPIDVPPLRQRLEDLPALCEAILAELGSQYELEA-----EAQQLLARHAWPGN 391
           LYYRL V P+ +P LR+R +D+  L +A +  L   +         +AQ +L R+ WPGN
Sbjct: 300 LYYRLRVFPLSLPALRERGDDILRLLDAFMLRLCRDHAFAPLTFTDDAQDVLLRYRWPGN 359

Query: 392 IRELRNVLERATLLADQPRLGVADLRAA----LGPLSPLAEAPVRQS------------- 434
           +RELRN +ER  +L     + V DL       L P S  A     QS             
Sbjct: 360 VRELRNFVERMLILHAGESVDVEDLPPECLRDLSPSSDSATGTAAQSATATCGTGVDGIL 419

Query: 435 -YREACEAFERGLIAGALAEQGGKVPEAAAALGLGRSTLYKKMAALGL 481
            ++ A  AFE   +A  L E GG V   A  +GL RS L++K+   G+
Sbjct: 420 DFKAARNAFETRFLAEQLQECGGNVSRLAERIGLERSHLHRKLKGYGI 467