Pairwise Alignments

Query, 481 a.a., putative transcriptional regulator from Pseudomonas putida KT2440

Subject, 459 a.a., sigma-54 dependent transcriptional regulator/response regulator (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  249 bits (635), Expect = 2e-70
 Identities = 162/384 (42%), Positives = 221/384 (57%), Gaps = 21/384 (5%)

Query: 117 LVVMRLPIHDDQGALIGAIGFALFDEL------RSLSPLLKRYASMQQELASTRSQLRAR 170
           L V+ L  +   G+ + A+    FD L        L  +L++ A   + L     +LR R
Sbjct: 74  LPVVMLTAYGTVGSAVEAMKCGAFDYLTKPADNEELVAVLEK-AWEHRRLVVENEELRKR 132

Query: 171 QAKYS-FAQFVGSSAPSLEAKRRARRGAGSDSPVLLLGETGTGKELLAHAIHAASARAHR 229
             +    A  VG+S      +   R+   S++ VL++GE+GTGKEL+A A+H AS RA +
Sbjct: 133 YVENDPTAPLVGASQVMHRMRDFIRQAGPSEATVLIMGESGTGKELIAQALHDASTRARQ 192

Query: 230 AFVSINSAAIPETLLEAEFFGTAPGAFTGADRKGRSGKLQLAEGGTLFLDEIGDMPLALQ 289
             V +N AA+P  LLE+E FG   GAFTGA  K + G+ QLA GGTLFLDEIG++PL LQ
Sbjct: 193 PLVKVNCAALPGHLLESELFGYVRGAFTGAV-KDKPGRFQLARGGTLFLDEIGELPLELQ 251

Query: 290 SKLLRVLQEKEYEPVGSNQMLRSDVRIIAATSIDLQAAMARGAFRADLYYRLNVLPIDVP 349
           +KLLRVLQE+  EP+G  + +  DVRIIAAT+ DL+  +A+G FR DLY+RLNVL +  P
Sbjct: 252 AKLLRVLQERVVEPLGGVRPVSVDVRIIAATNRDLRREVAKGTFREDLYFRLNVLEVVSP 311

Query: 350 PLRQRLEDLPALCEAILAELGSQYE-----LEAEAQQLLARHAWPGNIRELRNVLERATL 404
           PLR+R+EDLP L E +L +L  +       + A+  + L+RH+WPGN+REL NVLERA +
Sbjct: 312 PLRKRMEDLPQLVEELLGKLCRKNRKSIRCISADFFEALSRHSWPGNVRELENVLERALI 371

Query: 405 LADQPRLGVADLRAALGPLSPLA-----EAPVRQSYREAC--EAFERGLIAGALAEQGGK 457
           L+    L    L   L    P       E PV       C  +  E+G +  AL   GG 
Sbjct: 372 LSRTDSLSADALPPQLFGDEPQVADMQQERPVVDDDSRPCSLDEAEKGELLRALDVHGGH 431

Query: 458 VPEAAAALGLGRSTLYKKMAALGL 481
             + A ALG+ R TL  K+   GL
Sbjct: 432 REKTADALGISRRTLQYKLKKFGL 455